Miyakogusa Predicted Gene
- Lj3g3v0824610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0824610.1 tr|B9MT90|B9MT90_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_739338 PE=4
SV=1,75.89,1.99965e-42,DnaJ,Heat shock protein DnaJ, N-terminal; no
description,Heat shock protein DnaJ, N-terminal; UNCHAR,CUFF.41496.1
(324 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62649 similar to UniRef100_A7PSZ3 Cluster: Chromosome... 642 0.0
gnl|LJGI|TC60804 similar to UniRef100_A7NZW0 Cluster: Chromosome... 90 1e-17
gnl|LJGI|TC68450 similar to UniRef100_Q0D810 Cluster: Os07g01923... 50 8e-06
>gnl|LJGI|TC62649 similar to UniRef100_A7PSZ3 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 887
Score = 642 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Plus
Query: 1 atggctacacctcttatggcaggacttgctgtggctgctgcagcttatgctggtaaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atggctacacctcttatggcaggacttgctgtggctgctgcagcttatgctggtaaatat 257
Query: 61 ggtatacaggcttggcataatctcaggaatttgcctaaaaagttttatgaaggcggtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggtatacaggcttggcataatctcaggaatttgcctaaaaagttttatgaaggcggtttc 317
Query: 121 caggctaccatgactaggagagaagcagctctcatactgggtgttagagagcgcactcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 caggctaccatgactaggagagaagcagctctcatactgggtgttagagagcgcactcca 377
Query: 181 acagataagattaaagaagcacataagagggtgatgatcgctaaccatccagatgcaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 acagataagattaaagaagcacataagagggtgatgatcgctaaccatccagatgcaggt 437
Query: 241 ggcagccattaccttgcatccaaaattaatgaagcaaaagatatgttgcttggaaagccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggcagccattaccttgcatccaaaattaatgaagcaaaagatatgttgcttggaaagccc 497
Query: 301 aagggtggtgggtcagcattttga 324
||||||||||||||||||||||||
Sbjct: 498 aagggtggtgggtcagcattttga 521
>gnl|LJGI|TC60804 similar to UniRef100_A7NZW0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 943
Score = 89.7 bits (45), Expect = 1e-17
Identities = 70/77 (90%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 23 gacttgctgtggctgctgcagcttatgctggtaaatatggtatacagg-cttggcataat 81
||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||
Sbjct: 31 gacttgctgtggctgctacagcttatgctggtaaatatggtatacaggtttttgcaaaat 90
Query: 82 ctcaggaatttgcctaa 98
|||| |||| |||||||
Sbjct: 91 ctcaagaatgtgcctaa 107
>gnl|LJGI|TC68450 similar to UniRef100_Q0D810 Cluster: Os07g0192300 protein; n=1;
Oryza sativa Japonica Group|Rep: Os07g0192300 protein -
Oryza sativa subsp. japonica (Rice), partial (97%)
Length = 728
Score = 50.1 bits (25), Expect = 8e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 100 aagttttatgaaggcggtttccaggctaccatgactaggagagaagcagctct 152
||||| ||||| || ||||||||| |||| ||||| || ||||||||||||||
Sbjct: 238 aagttctatgatggtggtttccagcctacaatgacaagaagagaagcagctct 290