Miyakogusa Predicted Gene

Lj3g3v0824590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0824590.1 Non Chatacterized Hit- tr|D8RU93|D8RU93_SELML
Putative uncharacterized protein OS=Selaginella
moelle,41.35,0.000000000000002,BIOGENESIS OF LYSOSOME-RELATED
ORGANELLES COMPLEX 1 SUBUNIT 2,NULL; PHYTOENE DEHYDROGENASE,NULL;
BLO,CUFF.41494.1
         (390 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62948 similar to UniRef100_Q6YUT9 Cluster: Phytoene d...   773   0.0  

>gnl|LJGI|TC62948 similar to UniRef100_Q6YUT9 Cluster: Phytoene dehydrogenase-like
           protein; n=2; Oryza sativa|Rep: Phytoene
           dehydrogenase-like protein - Oryza sativa subsp.
           japonica (Rice), partial (88%)
          Length = 753

 Score =  773 bits (390), Expect = 0.0
 Identities = 390/390 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacaatatgaagaatgatgaagcccaagatcagaagcatgatgaacttgctgaatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atggacaatatgaagaatgatgaagcccaagatcagaagcatgatgaacttgctgaatca 266

                                                                       
Query: 61  cttaatgatctcttcaccagtatttccaccatgatcaaatcagagcttcaggggactaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cttaatgatctcttcaccagtatttccaccatgatcaaatcagagcttcaggggactaat 326

                                                                       
Query: 121 aatcatctggagcttctggagaagatgaacctgagggtggcagaagagtacaaagggttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aatcatctggagcttctggagaagatgaacctgagggtggcagaagagtacaaagggttt 386

                                                                       
Query: 181 ggtgatttggcttcagggttgagggtttttgtggagcagttgaaatgcaagagtggtagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggtgatttggcttcagggttgagggtttttgtggagcagttgaaatgcaagagtggtagc 446

                                                                       
Query: 241 tttaatgaatatgttgagcagattgatgccatagagaagcaagtgactgagtttgaagct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tttaatgaatatgttgagcagattgatgccatagagaagcaagtgactgagtttgaagct 506

                                                                       
Query: 301 gtggtctctatgcttgataaatatgtggctttgttggaatcaagagtgctatctgtgtac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtggtctctatgcttgataaatatgtggctttgttggaatcaagagtgctatctgtgtac 566

                                         
Query: 361 caacacaaaacccatcttccgaattgataa 390
           ||||||||||||||||||||||||||||||
Sbjct: 567 caacacaaaacccatcttccgaattgataa 596