Miyakogusa Predicted Gene

Lj3g3v0823570.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0823570.1 Non Chatacterized Hit- tr|K4BRZ2|K4BRZ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.22,6e-18,seg,NULL,CUFF.41492.1
         (1023 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63249 similar to UniRef100_A2RS74 Cluster: Adrb3 prot...  2028   0.0  
gnl|LJGI|BW598161                                                     121   9e-27
gnl|LJGI|BW597804 weakly similar to UniRef100_Q18X02 Cluster: Ma...   117   1e-25
gnl|LJGI|TC59369                                                      117   1e-25
gnl|LJGI|FS362183                                                     115   6e-25
gnl|LJGI|TC75487                                                       64   2e-09
gnl|LJGI|TC60665 similar to UniRef100_A7PX96 Cluster: Chromosome...    60   3e-08
gnl|LJGI|TC61113 homologue to UniRef100_A7QIW4 Cluster: Chromoso...    54   2e-06

>gnl|LJGI|TC63249 similar to UniRef100_A2RS74 Cluster: Adrb3 protein; n=2; Mus
            musculus|Rep: Adrb3 protein - Mus musculus (Mouse),
            partial (6%)
          Length = 1413

 Score = 2028 bits (1023), Expect = 0.0
 Identities = 1023/1023 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggtgctattggtagagaaactttcaaaactctacttcaagctagagaatcgccaccat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134  atggtgctattggtagagaaactttcaaaactctacttcaagctagagaatcgccaccat 193

                                                                        
Query: 61   caccatcaccatcacccccaaactgatgagttattgtcatcttcacttcatgcttttcaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194  caccatcaccatcacccccaaactgatgagttattgtcatcttcacttcatgcttttcaa 253

                                                                        
Query: 121  tcccatgtttcaagattcataggccaattagcattggatttgaaacccgggacagaccaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254  tcccatgtttcaagattcataggccaattagcattggatttgaaacccgggacagaccaa 313

                                                                        
Query: 181  accctgtccttgacatggtttcagaggtgttttcgcctcttcccaattatcaacaaggct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314  accctgtccttgacatggtttcagaggtgttttcgcctcttcccaattatcaacaaggct 373

                                                                        
Query: 241  tttgcaaagcttgttgtggatattgattatcctatgagtagatgggagaatgattccatt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374  tttgcaaagcttgttgtggatattgattatcctatgagtagatgggagaatgattccatt 433

                                                                        
Query: 301  gaagggtatctcagctacaccttgagtttgcttcagcttttgaattccatttcttcttca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434  gaagggtatctcagctacaccttgagtttgcttcagcttttgaattccatttcttcttca 493

                                                                        
Query: 361  atttctcatcttggtcaatctaaactttctctggctcatggtttgagcctgttggagaag 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494  atttctcatcttggtcaatctaaactttctctggctcatggtttgagcctgttggagaag 553

                                                                        
Query: 421  tcaccttctttggctagaaagcatcttagtgcgtatttgaattcatgttcaggtcttcca 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554  tcaccttctttggctagaaagcatcttagtgcgtatttgaattcatgttcaggtcttcca 613

                                                                        
Query: 481  gaatcaattctgctatcacaaaagcaactaggaggagtagcttttcccagaatcaattct 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614  gaatcaattctgctatcacaaaagcaactaggaggagtagcttttcccagaatcaattct 673

                                                                        
Query: 541  ccaaccaacgtaagagtttatcgtgtatccaaacatccagttaaagcaggagatgatgat 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674  ccaaccaacgtaagagtttatcgtgtatccaaacatccagttaaagcaggagatgatgat 733

                                                                        
Query: 601  aaagcaaggattctttctggcaaggaaaggattgttcatgagggtattaaggaaatgaag 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734  aaagcaaggattctttctggcaaggaaaggattgttcatgagggtattaaggaaatgaag 793

                                                                        
Query: 661  agtgttggattctgggtatgtggggttgtcttgtcttgtttatatggtgatgctaggcct 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794  agtgttggattctgggtatgtggggttgtcttgtcttgtttatatggtgatgctaggcct 853

                                                                        
Query: 721  tacatggagctgaggaaaattgctggtgggtttgaaagttcttcagttgccacccttgat 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854  tacatggagctgaggaaaattgctggtgggtttgaaagttcttcagttgccacccttgat 913

                                                                        
Query: 781  ttcaagatcagtgaacagttgatggagaaaatgcctatgttcggcgagatccaagaactg 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914  ttcaagatcagtgaacagttgatggagaaaatgcctatgttcggcgagatccaagaactg 973

                                                                        
Query: 841  aacagttttgttgctgaagttgctgcttctgatgaagtaaaaagacatgaagaaaccact 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974  aacagttttgttgctgaagttgctgcttctgatgaagtaaaaagacatgaagaaaccact 1033

                                                                        
Query: 901  gaattgcagacaaagctgcatgaatttgagaagcttcttgatggcatgagcaaggaggtg 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 gaattgcagacaaagctgcatgaatttgagaagcttcttgatggcatgagcaaggaggtg 1093

                                                                        
Query: 961  gataatctgtttgctgatgtaatgactcagagatctgaattgattaacgtctttagattc 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 gataatctgtttgctgatgtaatgactcagagatctgaattgattaacgtctttagattc 1153

               
Query: 1021 tag 1023
            |||
Sbjct: 1154 tag 1156


>gnl|LJGI|BW598161 
          Length = 464

 Score =  121 bits (61), Expect = 9e-27
 Identities = 61/61 (100%)
 Strand = Plus / Plus

                                                                       
Query: 289 aatgattccattgaagggtatctcagctacaccttgagtttgcttcagcttttgaattcc 348
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aatgattccattgaagggtatctcagctacaccttgagtttgcttcagcttttgaattcc 463

            
Query: 349 a 349
           |
Sbjct: 464 a 464


>gnl|LJGI|BW597804 weakly similar to UniRef100_Q18X02 Cluster: Major facilitator
           superfamily MFS_1; n=1; Desulfitobacterium hafniense
           DCB-2|Rep: Major facilitator superfamily MFS_1 -
           Desulfitobacterium hafniense (strain DCB-2), partial
           (5%)
          Length = 439

 Score =  117 bits (59), Expect = 1e-25
 Identities = 101/111 (90%), Gaps = 3/111 (2%)
 Strand = Plus / Plus

                                                                       
Query: 209 gttttcgcctcttcccaattatcaacaag-gcttttgcaaagcttgttgtggatattgat 267
           |||||| |||||||||||||||||||||| |||||||||  ||  | |||||||||||||
Sbjct: 329 gttttcacctcttcccaattatcaacaagagcttttgcagggcgggctgtggatattgat 388

                                                              
Query: 268 tatcctatgagtag-atgg-gagaatgattccattgaagggtatctcagct 316
           |||||||||||||| |||| || ||||||||||||||||||||||||||||
Sbjct: 389 tatcctatgagtagcatggagaaaatgattccattgaagggtatctcagct 439


>gnl|LJGI|TC59369 
          Length = 1311

 Score =  117 bits (59), Expect = 1e-25
 Identities = 164/199 (82%)
 Strand = Plus / Plus

                                                                       
Query: 597 tgataaagcaaggattctttctggcaaggaaaggattgttcatgagggtattaaggaaat 656
           ||||||||||||| || ||||||| |||||| || |||||||||| | | | ||||||||
Sbjct: 658 tgataaagcaaggtttttttctggtaaggaatgggttgttcatgaagctgtgaaggaaat 717

                                                                       
Query: 657 gaagagtgttggattctgggtatgtggggttgtcttgtcttgtttatatggtgatgctag 716
            |||||| |||| |||||||||||||||||  | |||||| |||| | |  |||||||| 
Sbjct: 718 aaagagtattgggttctgggtatgtggggtattgttgtctggtttgtgtactgatgctaa 777

                                                                       
Query: 717 gccttacatggagctgaggaaaattgctggtgggtttgaaagttcttcagttgccaccct 776
           ||| ||||||||||||| |||||| || |||| ||||||  |||||||| ||  ||| ||
Sbjct: 778 gccatacatggagctgaagaaaatggcaggtgagtttgatggttcttcaattctcacact 837

                              
Query: 777 tgatttcaagatcagtgaa 795
           ||||| ||| || ||||||
Sbjct: 838 tgattccaaaataagtgaa 856



 Score =  115 bits (58), Expect = 6e-25
 Identities = 115/134 (85%)
 Strand = Plus / Plus

                                                                       
Query: 234 caaggcttttgcaaagcttgttgtggatattgattatcctatgagtagatgggagaatga 293
           ||||||| ||||||| |||| ||||||||| ||||| || ||||||  |||||||  |||
Sbjct: 379 caaggctcttgcaaaccttgctgtggatatagattacccaatgagtgtatgggaggttga 438

                                                                       
Query: 294 ttccattgaagggtatctcagctacaccttgagtttgcttcagcttttgaattccatttc 353
           ||| |||||||||||||||||||||| |||| |||| ||  | ||||| |||||||||||
Sbjct: 439 ttctattgaagggtatctcagctacagcttgtgtttactggatcttttcaattccatttc 498

                         
Query: 354 ttcttcaatttctc 367
           ||||||| ||||||
Sbjct: 499 ttcttcattttctc 512


>gnl|LJGI|FS362183 
          Length = 698

 Score =  115 bits (58), Expect = 6e-25
 Identities = 115/134 (85%)
 Strand = Plus / Plus

                                                                       
Query: 234 caaggcttttgcaaagcttgttgtggatattgattatcctatgagtagatgggagaatga 293
           ||||||| ||||||| |||| ||||||||| ||||| || ||||||  |||||||  |||
Sbjct: 530 caaggctcttgcaaaccttgctgtggatatagattacccaatgagtgtatgggaggttga 589

                                                                       
Query: 294 ttccattgaagggtatctcagctacaccttgagtttgcttcagcttttgaattccatttc 353
           ||| |||||||||||||||||||||| |||| |||| ||  | ||||| |||||||||||
Sbjct: 590 ttctattgaagggtatctcagctacagcttgtgtttactggatcttttcaattccatttc 649

                         
Query: 354 ttcttcaatttctc 367
           ||||||| ||||||
Sbjct: 650 ttcttcattttctc 663


>gnl|LJGI|TC75487 
          Length = 520

 Score = 63.9 bits (32), Expect = 2e-09
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 456 tttgaattcatgttcaggtcttccagaatcaattctgctatcacaaaa 503
           |||| |||||||||||| ||||||||||| |||||||||| |||||||
Sbjct: 233 tttggattcatgttcagatcttccagaattaattctgctaccacaaaa 186


>gnl|LJGI|TC60665 similar to UniRef100_A7PX96 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 738

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 462 ttcatgttcaggtcttccagaatcaattctgctatcacaaaa 503
           ||||||||||| ||||||||||| |||||||||| |||||||
Sbjct: 486 ttcatgttcagatcttccagaattaattctgctaccacaaaa 445


>gnl|LJGI|TC61113 homologue to UniRef100_A7QIW4 Cluster: Chromosome chr2 scaffold_105,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_105, whole genome shotgun
            sequence - Vitis vinifera (Grape), complete
          Length = 2268

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 461  attcatgttcaggtcttccagaatcaattctgctatcacaaaa 503
            ||||| |||||| ||||| |||||||||||||||| |||||||
Sbjct: 1638 attcacgttcagatcttctagaatcaattctgctaccacaaaa 1596