Miyakogusa Predicted Gene

Lj3g3v0821420.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0821420.1 Non Chatacterized Hit- tr|I1JVV9|I1JVV9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27732
PE,68.82,0,Dirigent,Plant disease resistance response protein;
seg,NULL; NUCLEOPORIN-RELATED,NULL,CUFF.41477.1
         (558 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67856 weakly similar to UniRef100_A7PW09 Cluster: Chr...   305   2e-82

>gnl|LJGI|TC67856 weakly similar to UniRef100_A7PW09 Cluster: Chromosome chr8
           scaffold_34, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_34, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (43%)
          Length = 598

 Score =  305 bits (154), Expect = 2e-82
 Identities = 187/198 (94%)
 Strand = Plus / Plus

                                                                       
Query: 361 gagggtgtgtacaatggtagcaccctcagcattcttgggaggaatgttgttatggaaaaa 420
           |||||||| |||||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 272 gagggtgtatacaatggcagcaccgtcagcattcttgggaggaatgctgttatggaaaaa 331

                                                                       
Query: 421 gttagggaaatgcctgttgtaggaggtagtggggtattcagatttgcaaggggttctgct 480
           |||||||||||||||||||| ||||||||||||||||| |||||||||||||| | ||||
Sbjct: 332 gttagggaaatgcctgttgttggaggtagtggggtatttagatttgcaaggggctttgct 391

                                                                       
Query: 481 ttggctaagacttatatgtttaacactacttctggtgttgcaattgttgagtacaatgtg 540
           ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||
Sbjct: 392 ttggctaagacttatatgtttaacgttacttctggtgttgcgattgttgagtacaatgtg 451

                             
Query: 541 tctgtgatgcatgtttga 558
           ||||||||||||||||||
Sbjct: 452 tctgtgatgcatgtttga 469



 Score =  174 bits (88), Expect = 4e-43
 Identities = 103/108 (95%)
 Strand = Plus / Plus

                                                                       
Query: 102 tgcaaaacctgtggaaaaactcacccaactccacttctatttccatgacaacctaactag 161
           |||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 150 tgcaaaacccatggaaaaactcacccaattccacttctatttccatgacaacctaactag 209

                                                           
Query: 162 taaaaacccaaccgctatgcaaattgttggacctccaaaaggttccac 209
           ||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 210 taaaaacccgaccactatgcaaattgttggacctccaaaaggttccac 257