Miyakogusa Predicted Gene

Lj3g3v0821290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0821290.1 Non Chatacterized Hit- tr|I1JWI2|I1JWI2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44662
PE,84.33,0,seg,NULL; FAMILY NOT NAMED,NULL; GRAS,Transcription factor
GRAS,CUFF.41469.1
         (1306 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77925 similar to UniRef100_A7PFX5 Cluster: Chromosome...    76   6e-13
gnl|LJGI|GO038157 similar to UniRef100_A7PFX5 Cluster: Chromosom...    66   6e-10
gnl|LJGI|BP044387 weakly similar to UniRef100_A7Q1V5 Cluster: Ch...    58   1e-07

>gnl|LJGI|TC77925 similar to UniRef100_A7PFX5 Cluster: Chromosome chr6 scaffold_15,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_15, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (24%)
          Length = 747

 Score = 75.8 bits (38), Expect = 6e-13
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1054 atcaagaacatcattgcttgtgagggagttgatagaaaggagaggcatgaaaaactcgag 1113
            ||||||||||||||||| ||||||||| |||| ||||||||| |||||||||| || || 
Sbjct: 174  atcaagaacatcattgcgtgtgagggatttgaaagaaaggaggggcatgaaaagctggaa 233

                  
Query: 1114 aaatgg 1119
            ||||||
Sbjct: 234  aaatgg 239


>gnl|LJGI|GO038157 similar to UniRef100_A7PFX5 Cluster: Chromosome chr6 scaffold_15,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_15, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (28%)
          Length = 416

 Score = 65.9 bits (33), Expect = 6e-10
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                 
Query: 1054 atcaagaacatcattgcttgtgagggagttgatagaaaggagaggcatgaaaa 1106
            ||||||||||| |||||||||||||||| ||| |||||||| || ||||||||
Sbjct: 312  atcaagaacattattgcttgtgagggagctgaaagaaaggaaagacatgaaaa 260


>gnl|LJGI|BP044387 weakly similar to UniRef100_A7Q1V5 Cluster: Chromosome chr13
            scaffold_45, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (18%)
          Length = 378

 Score = 58.0 bits (29), Expect = 1e-07
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 1058 agaacatcattgcttgtgagggagttgatagaaaggagaggcatgaaaa 1106
            |||||||| |||| ||||||||| |||| ||||||||||||| ||||||
Sbjct: 343  agaacatccttgcgtgtgagggatttgaaagaaaggagaggcctgaaaa 295