Miyakogusa Predicted Gene

Lj3g3v0821140.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0821140.1 tr|G7J1P0|G7J1P0_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g0,81.86,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.41462.1
         (2198 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW612204 similar to UniRef100_Q77IW3 Cluster: ORF91; n=...   220   3e-56

>gnl|LJGI|BW612204 similar to UniRef100_Q77IW3 Cluster: ORF91; n=3;
           Nucleopolyhedrovirus|Rep: ORF91 - Helicoverpa zea SNPV,
           partial (30%)
          Length = 457

 Score =  220 bits (111), Expect = 3e-56
 Identities = 114/115 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccaccaccaccgcggccgccaccgtcaccggcgaaacaagacaaattctatttcttc 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 160 atgccaccaccaccgcggccgccaccgtcaccggcgaaaccagacaaattctatttcttc 219

                                                                  
Query: 61  tacggccaccggaagcccgcccagaaccgccccaccgtccgcggcggcctcttct 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tacggccaccggaagcccgcccagaaccgccccaccgtccgcggcggcctcttct 274



 Score =  212 bits (107), Expect = 7e-54
 Identities = 107/107 (100%)
 Strand = Plus / Plus

                                                                       
Query: 192 gaagtgggacccacacttcctcccccaccggaaccccaaaccaccctcaccatcgccgtc 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gaagtgggacccacacttcctcccccaccggaaccccaaaccaccctcaccatcgccgtc 410

                                                          
Query: 252 gccgtcgtcttcattctccgcctccctccgcctctctccgatcgccc 298
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gccgtcgtcttcattctccgcctccctccgcctctctccgatcgccc 457