Miyakogusa Predicted Gene
- Lj3g3v0819880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0819880.1 Non Chatacterized Hit- tr|Q75L83|Q75L83_ORYSJ
Putative SF16 protein OS=Oryza sativa subsp. japonica
,31.43,2e-18,IQ,IQ motif, EF-hand binding site; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; DUF400,CUFF.41449.1
(1311 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341775 similar to UniRef100_A7Q1X8 Cluster: Chromosom... 567 e-161
gnl|LJGI|AV409917 107 2e-22
>gnl|LJGI|FS341775 similar to UniRef100_A7Q1X8 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 704
Score = 567 bits (286), Expect = e-161
Identities = 286/286 (100%)
Strand = Plus / Plus
Query: 279 ggacaagtcagaagagtttgaaaatgttaaaacttggcatgaggcttctcaattcacata 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ggacaagtcagaagagtttgaaaatgttaaaacttggcatgaggcttctcaattcacata 478
Query: 339 caatttccagaggaagattgaagaatcctcagccatcaaaattcaaacaacatttagagg 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 caatttccagaggaagattgaagaatcctcagccatcaaaattcaaacaacatttagagg 538
Query: 399 ttacctagcaaggaaagctttgagagcattgaagggaatagtgaagcttcaagctatcat 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttacctagcaaggaaagctttgagagcattgaagggaatagtgaagcttcaagctatcat 598
Query: 459 tcgtggcagagctgttagacgccacactattagtactctgaagagcttgcagtccatagt 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tcgtggcagagctgttagacgccacactattagtactctgaagagcttgcagtccatagt 658
Query: 519 aaatatccagtcccaggtctttgcaagaaatctccaaatggttgga 564
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aaatatccagtcccaggtctttgcaagaaatctccaaatggttgga 704
Score = 424 bits (214), Expect = e-118
Identities = 214/214 (100%)
Strand = Plus / Plus
Query: 1 atggccaagggctggtttagcatggtgaagaggctctttatatgggatacacattccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atggccaagggctggtttagcatggtgaagaggctctttatatgggatacacattccaca 182
Query: 61 caagagaagaaggagaaaagaaggaagtggatatttgggagagtaaagaacaagagattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 caagagaagaaggagaaaagaaggaagtggatatttgggagagtaaagaacaagagattg 242
Query: 121 gctacaattgaagccccaccaccatcaaaagaaacaagactgagtgaagctgaggaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gctacaattgaagccccaccaccatcaaaagaaacaagactgagtgaagctgaggaaaaa 302
Query: 181 cacagcaagcatgctttgaaagtggctattgcct 214
||||||||||||||||||||||||||||||||||
Sbjct: 303 cacagcaagcatgctttgaaagtggctattgcct 336
>gnl|LJGI|AV409917
Length = 420
Score = 107 bits (54), Expect = 2e-22
Identities = 105/122 (86%)
Strand = Plus / Plus
Query: 23 tggtgaagaggctctttatatgggatacacattccacacaagagaagaaggagaaaagaa 82
||||||||||| ||||||||||||| || ||||||||||||||||||||||||| || ||
Sbjct: 288 tggtgaagaggttctttatatgggacactcattccacacaagagaagaaggagagaaaaa 347
Query: 83 ggaagtggatatttgggagagtaaagaacaagagattggctacaattgaagccccaccac 142
|||| ||| ||||||| || |||||| ||||||||| || ||||| ||| |||||||
Sbjct: 348 ggaaatgggtatttggaaggctaaagagcaagagattaccttcaattacagctccaccac 407
Query: 143 ca 144
||
Sbjct: 408 ca 409