Miyakogusa Predicted Gene
- Lj3g3v0808830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0808830.1 Non Chatacterized Hit- tr|D8TXM6|D8TXM6_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,45.45,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,NODE_35142_length_1739_cov_47.617596.path1.1
(1470 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64600 weakly similar to UniRef100_A9RP81 Cluster: Pre... 747 0.0
gnl|LJGI|TC68607 similar to UniRef100_A7P5I3 Cluster: Chromosome... 579 e-164
gnl|LJGI|FS353154 similar to UniRef100_A7P5I3 Cluster: Chromosom... 170 2e-41
gnl|LJGI|FS326841 similar to UniRef100_A7P5I3 Cluster: Chromosom... 101 1e-20
gnl|LJGI|TC66146 weakly similar to UniRef100_A7P5I3 Cluster: Chr... 68 2e-10
>gnl|LJGI|TC64600 weakly similar to UniRef100_A9RP81 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(30%)
Length = 783
Score = 747 bits (377), Expect = 0.0
Identities = 592/664 (89%), Gaps = 6/664 (0%)
Strand = Plus / Plus
Query: 1 atggcaaaccaaaaccctccttcaaccccaacctcagatgttgaagctcagaaaaccact 60
||||| |||||||||||||||||||| || ||||||||||||| | ||| ||||
Sbjct: 83 atggctaaccaaaaccctccttcaaca------tctgatgttgaagctctggaaatcact 136
Query: 61 ccttctcaaacaaaccctccacccaaaagattcacagtcaaaactgtgctgcagaatgtg 120
||||| |||| | ||| ||| ||||||| ||||| | |||||| | ||| ||||||||
Sbjct: 137 ccttcagaaactagccccccagccaaaaggttcacggccaaaacggctctggagaatgtg 196
Query: 121 aaaaccaacttggttttccattcaaaatgggctgaactaaatggtgccatgggtgacctt 180
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 197 aaaaccaacttggttttccgttcaaaatggggtgaactaaatggtgccatgggtgacctt 256
Query: 181 ggcaccttcatacctatagtgctagcattgactctatccaagaacctcaaccttggcacc 240
||||| | |||||| || | || |||||||| ||| ||||| |||||||||||||||||
Sbjct: 257 ggcacttacatacccattattctggcattgaccctagccaaggacctcaaccttggcacc 316
Query: 241 acattaatcttcacaggtatctacaatatttttactggtatgatttatggggtccccatg 300
|| ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 317 accttaattttcacaggtatctacaatattatcactggtatgatttatggggtccccatg 376
Query: 301 cctgtccagccaatgaagtctattgctgctgaggccttatcggactccggctttggcgtg 360
||||||||||| |||||||| |||||||| |||||||| || ||| || ||| ||||
Sbjct: 377 cctgtccagcccatgaagtccattgctgccgaggccttgtcagacaccaacttcaacgtg 436
Query: 361 ccggagattatgaccgccggaatcttaaccggggctgtgttgttttttctgggtatcact 420
|||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||
Sbjct: 437 ccggagattatgaccgccggaatcttaaccggtgctgtgttgtttgttcttggtatcact 496
Query: 421 gggttgatgcagctggtgtacaagttgattcctctatctgttgttaggggaatccaactg 480
|| |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 497 ggtttgatgaagctcgtgtacaagttgattcctttatctgttgttaggggaatccaactg 556
Query: 481 gcacaggggttgtcttttgctataactgctgttaaatatgtgaggaagattcaggatatc 540
||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || ||
Sbjct: 557 gcacaggggttgtcttttgctttaactgctgttaaatatgtgaggaaaattcagaatctc 616
Query: 541 ccaaagtctaaatctttgggaccaaggcattggtttggattggatgggttggttttggct 600
|||||||||||||||||||||| |||||||||| |||| || |||||||||||||||||
Sbjct: 617 ccaaagtctaaatctttgggacaaaggcattggcttgggttagatgggttggttttggcc 676
Query: 601 atagtttgtgcctgttttattgtgattgtgaatggggctggggaacagaatcgtgggtgt 660
||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 677 atagtttgtgcctgttttattgtcattgtgaatggggctggggaaaagaatcgcgggtgc 736
Query: 661 tgtg 664
||||
Sbjct: 737 tgtg 740
>gnl|LJGI|TC68607 similar to UniRef100_A7P5I3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (31%)
Length = 728
Score = 579 bits (292), Expect = e-164
Identities = 391/424 (92%)
Strand = Plus / Plus
Query: 1047 tttgatgaacttggttggttgttggtttggcgccgtgccgacttgccatggggctggggg 1106
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 1 tttgatgaacttggttggttgttggttcggcgccatgccgacttgccatggggctggggg 60
Query: 1107 gcttgcagggcagtacaagtttggtggaaggagtggtgggtgtgtggcacttcttggtgc 1166
|||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 61 gcttgcagggcagtacaaatttggtggaaggagtggtgggtgtgtggcgcttattggtgc 120
Query: 1167 tgctaaattgatactgggtttggttctgggaacttcattggctcacattttgaagcagtt 1226
|| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 121 cgccaaattgatacttggtttggtgctgggaacttctttggctcacattttgaagcagtt 180
Query: 1227 tccagtggggatcttaggtgtgttgcttctgtttgctggaattgaacttgccatgtgtgc 1286
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 cccagtggggatcttaggtgtgttgcttctgtttgctggaattgaacttgctatgtgtgc 240
Query: 1287 tagggacatgaacaccaaggaagattcctttgtgtgtcttatttgcactgcagtttcact 1346
|||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 241 tagggacatgaataccaaagaagactcctttgtgtgtcttatttgcactgcagtttctct 300
Query: 1347 aatgggttcaagtgctgctcttggatttctgtgtggaatggttgtgtatgtgctccttaa 1406
|||||||||||||||||||||| ||| || ||||||| ||||||||||| | |||||
Sbjct: 301 tgtgggttcaagtgctgctcttggctttttggttggaatgattgtgtatgtgattcttaa 360
Query: 1407 gctaaggagttggacaaaagataagccactttctaccatttggacactgagaagccctat 1466
||||||||||||||||| ||| ||||||||||||| |||||||| | || |||||| ||
Sbjct: 361 gctaaggagttggacaagggatgagccactttctactatttggactcagaaaagccccat 420
Query: 1467 gtaa 1470
||||
Sbjct: 421 gtaa 424
>gnl|LJGI|FS353154 similar to UniRef100_A7P5I3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 602
Score = 170 bits (86), Expect = 2e-41
Identities = 248/302 (82%)
Strand = Plus / Minus
Query: 1090 tgccatggggctggggggcttgcagggcagtacaagtttggtggaaggagtggtgggtgt 1149
|||||||| ||||| ||| | || || ||||||||||||||||| |||||||| ||||||
Sbjct: 587 tgccatggtgctggtgggttagctggacagtacaagtttggtgggaggagtggagggtgt 528
Query: 1150 gtggcacttcttggtgctgctaaattgatactgggtttggttctgggaacttcattggct 1209
|||||| |||||||||| || |||||| | ||||||| || |||||||||| || |||
Sbjct: 527 gtggcaattcttggtgcagccaaattggtgttgggttttgtgttgggaacttctttagct 468
Query: 1210 cacattttgaagcagtttccagtggggatcttaggtgtgttgcttctgtttgctggaatt 1269
|| |||| || || ||||||||||| ||||| || || ||||| |||||||||| |||
Sbjct: 467 cattttttcaaccaatttccagtgggaatcttgggggttctgcttttgtttgctgggatt 408
Query: 1270 gaacttgccatgtgtgctagggacatgaacaccaaggaagattcctttgtgtgtcttatt 1329
||| | |||||| | | |||||||| || ||||| || ||||| |||||| ||||||
Sbjct: 407 gaattggccatggcttcaagggacatcaataccaaagaggattcttttgtgatgcttatt 348
Query: 1330 tgcactgcagtttcactaatgggttcaagtgctgctcttggatttctgtgtggaatggtt 1389
|| || || ||||| || |||| ||||||||||||||||||||| ||||||||||| ||
Sbjct: 347 tgtacggctgtttctctggtgggatcaagtgctgctcttggatttttgtgtggaatgatt 288
Query: 1390 gt 1391
||
Sbjct: 287 gt 286
>gnl|LJGI|FS326841 similar to UniRef100_A7P5I3 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 755
Score = 101 bits (51), Expect = 1e-20
Identities = 378/487 (77%)
Strand = Plus / Plus
Query: 137 tccattcaaaatgggctgaactaaatggtgccatgggtgaccttggcaccttcataccta 196
|||| |||| |||||||||||| || || |||||||| ||||| ||||||| |||||| |
Sbjct: 195 tccactcaacatgggctgaactcaacggagccatgggcgacctcggcacctacataccca 254
Query: 197 tagtgctagcattgactctatccaagaacctcaaccttggcaccacattaatcttcacag 256
| || || || | || || |||| ||||||||||| ||||||||||| || |||||||
Sbjct: 255 tcgttctctcactcaccttagccaaaaacctcaacctgggcaccacattgattttcacag 314
Query: 257 gtatctacaatatttttactggtatgatttatggggtccccatgcctgtccagccaatga 316
| || ||||| || | || || || || || ||||||||||| || ||||| ||||
Sbjct: 315 ggatgtacaacatcatcaccggcgcaatctacggcgtccccatgccggttcagcccatga 374
Query: 317 agtctattgctgctgaggccttatcggactccggctttggcgtgccggagattatgaccg 376
|||| || || || |||||| | || ||| || ||| | |||||||||||| ||| ||
Sbjct: 375 agtccatcgccgccgaggccctctccgaccccaacttcgccgtgccggagatcatggcct 434
Query: 377 ccggaatcttaaccggggctgtgttgttttttctgggtatcactgggttgatgcagctgg 436
|||| || || ||||| || |||||| | |||||||| || |||||||||||| |||
Sbjct: 435 ccgggatattgaccggagccgtgttgatggttctgggttgtacagggttgatgcagttgg 494
Query: 437 tgtacaagttgattcctctatctgttgttaggggaatccaactggcacaggggttgtctt 496
|||||| | |||||||||| ||||| || || || || || |||||||| |||||||
Sbjct: 495 cctacaagctcattcctctatgcgttgtcagagggattcagctcgcacagggcttgtctt 554
Query: 497 ttgctataactgctgttaaatatgtgaggaagattcaggatatcccaaagtctaaatctt 556
|||| | |||||||| |||||||| || || | ||| || | || ||||||||| | |
Sbjct: 555 ttgccttcactgctgtgaaatatgttagaaaagtgcagaatctgcctaagtctaaagcct 614
Query: 557 tgggaccaaggcattggtttggattggatgggttggttttggctatagtttgtgcctgtt 616
||| |||| ||||||||||| |||||||||||||| || | || |||| |||||
Sbjct: 615 tggagaatcggcactggtttggatttgatgggttggttttagcacttgtatgtgtctgtt 674
Query: 617 ttattgt 623
|||||||
Sbjct: 675 ttattgt 681
>gnl|LJGI|TC66146 weakly similar to UniRef100_A7P5I3 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 849
Score = 67.9 bits (34), Expect = 2e-10
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1117 cagtacaagtttggtggaaggagtggtgggtgtgtggcacttcttggtgctgctaaattg 1176
|||||||||||| ||||| ||||| |||| |||||| |||||||||||| ||| ||||||
Sbjct: 760 cagtacaagtttagtggagggagttgtggatgtgtgacacttcttggtgttgccaaattg 819
Query: 1177 at 1178
||
Sbjct: 820 at 821