Miyakogusa Predicted Gene
- Lj3g3v0807670.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0807670.2 tr|G7IVC2|G7IVC2_MEDTR E3 ubiquitin-protein
ligase synoviolin OS=Medicago truncatula
GN=MTR_3g007760,85.67,0,zf-RING_2,Zinc finger, RING-type;
CUE,Ubiquitin system component Cue; SYNOVIOLIN-RELATED,NULL; no
de,CUFF.41441.2
(1776 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65546 similar to UniRef100_A7Q4Z5 Cluster: Chromosome... 1021 0.0
gnl|LJGI|BE122610 homologue to UniRef100_A7Q4Z5 Cluster: Chromos... 690 0.0
gnl|LJGI|TC79864 weakly similar to UniRef100_A7Q4Z5 Cluster: Chr... 264 2e-69
>gnl|LJGI|TC65546 similar to UniRef100_A7Q4Z5 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(33%)
Length = 1178
Score = 1021 bits (515), Expect = 0.0
Identities = 515/515 (100%)
Strand = Plus / Plus
Query: 1262 accctgccagacataccgtgcctgcaggattctatcaaaatcagacactgaacaacgccg 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 accctgccagacataccgtgcctgcaggattctatcaaaatcagacactgaacaacgccg 338
Query: 1322 aaggtgttcctctaaggggtccagggctggactcaggttggttgcattcttggccaaatc 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaggtgttcctctaaggggtccagggctggactcaggttggttgcattcttggccaaatc 398
Query: 1382 aaggtattgatggagctggtccatctactgctatcagaacagttggactgggaagagttc 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aaggtattgatggagctggtccatctactgctatcagaacagttggactgggaagagttc 458
Query: 1442 aaatgatgatgaggcatcttgcatctgttggagaaacttatgctcagactgcctttgaag 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaatgatgatgaggcatcttgcatctgttggagaaacttatgctcagactgcctttgaag 518
Query: 1502 atactgcttggaacctctggcctattaatccctctcaggcttctgcaagtggttcaacca 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 atactgcttggaacctctggcctattaatccctctcaggcttctgcaagtggttcaacca 578
Query: 1562 ttccttccactggtggaagattgccaggaggaactggtagtttacatataaggacgcctt 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttccttccactggtggaagattgccaggaggaactggtagtttacatataaggacgcctt 638
Query: 1622 cacgttcggcaagtgataatacagcaaatttacttgctatggccgacactgttcgggagg 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 cacgttcggcaagtgataatacagcaaatttacttgctatggccgacactgttcgggagg 698
Query: 1682 tcctacctcatattccagatgacataatattccaggacttgcaacaaacaaattctgtca 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tcctacctcatattccagatgacataatattccaggacttgcaacaaacaaattctgtca 758
Query: 1742 ccgttactgtgaataatcttctccaaatgtgacgt 1776
|||||||||||||||||||||||||||||||||||
Sbjct: 759 ccgttactgtgaataatcttctccaaatgtgacgt 793
Score = 557 bits (281), Expect = e-158
Identities = 281/281 (100%)
Strand = Plus / Plus
Query: 352 gtgccaccaacaatttatcaggcaggtctttggtcaacttggctgattgtgctttgttct 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtgccaccaacaatttatcaggcaggtctttggtcaacttggctgattgtgctttgttct 62
Query: 412 tttaagatgtttcaagctctagctagagatcgcttagatcggctaaatgcatctccatct 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tttaagatgtttcaagctctagctagagatcgcttagatcggctaaatgcatctccatct 122
Query: 472 gctacaccctggacatatcttcgtgtatattcagcactgctattcattttcttggttgat 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gctacaccctggacatatcttcgtgtatattcagcactgctattcattttcttggttgat 182
Query: 532 gttctctggataaggctttgtctggcgacatatacaacacatgcgtcctctatgtttctg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gttctctggataaggctttgtctggcgacatatacaacacatgcgtcctctatgtttctg 242
Query: 592 ttactattctttgagcctttgagtattgcttttgagaccct 632
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttactattctttgagcctttgagtattgcttttgagaccct 283
>gnl|LJGI|BE122610 homologue to UniRef100_A7Q4Z5 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(12%)
Length = 354
Score = 690 bits (348), Expect = 0.0
Identities = 351/352 (99%)
Strand = Plus / Plus
Query: 1068 ctgtaatcacctcttccatctttcatgtttgagatcttggttggatcaaggcctgaccga 1127
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtaatcacctcttccatcttgcatgtttgagatcttggttggatcaaggcctgaccga 60
Query: 1128 gatatacacttgtccaacatgccgaaagccactttttgcaggccggcctgaaaatgaaac 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatatacacttgtccaacatgccgaaagccactttttgcaggccggcctgaaaatgaaac 120
Query: 1188 aaactctagtgcgggagtaatatctagtgatgagcaacttgcacgccaaatgagtgcagg 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaactctagtgcgggagtaatatctagtgatgagcaacttgcacgccaaatgagtgcagg 180
Query: 1248 atttgatcggccaaaccctgccagacataccgtgcctgcaggattctatcaaaatcagac 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atttgatcggccaaaccctgccagacataccgtgcctgcaggattctatcaaaatcagac 240
Query: 1308 actgaacaacgccgaaggtgttcctctaaggggtccagggctggactcaggttggttgca 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actgaacaacgccgaaggtgttcctctaaggggtccagggctggactcaggttggttgca 300
Query: 1368 ttcttggccaaatcaaggtattgatggagctggtccatctactgctatcaga 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcttggccaaatcaaggtattgatggagctggtccatctactgctatcaga 352
>gnl|LJGI|TC79864 weakly similar to UniRef100_A7Q4Z5 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (6%)
Length = 401
Score = 264 bits (133), Expect = 2e-69
Identities = 136/137 (99%)
Strand = Plus / Plus
Query: 1 atggctttgaggattatagcggtttcagcggtttcaacagtgttaagttttgtgggtctg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 atggctttgaggattatagcggtttcagcggtttcaacactgttaagttttgtgggtctg 324
Query: 61 cagttttgcacagacttgtcattagataaacttagatcagatggactaattggctggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagttttgcacagacttgtcattagataaacttagatcagatggactaattggctggaat 384
Query: 121 ttaactcaatttgacaa 137
|||||||||||||||||
Sbjct: 385 ttaactcaatttgacaa 401