Miyakogusa Predicted Gene

Lj3g3v0797360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0797360.1 Non Chatacterized Hit- tr|D8RS49|D8RS49_SELML
Putative uncharacterized protein OS=Selaginella
moelle,27.75,2e-18,coiled-coil,NULL; DUF1191,Protein of unknown
function DUF1191; seg,NULL,CUFF.41399.1
         (955 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV769456 similar to UniRef100_A7QKC8 Cluster: Chromosom...   801   0.0  

>gnl|LJGI|AV769456 similar to UniRef100_A7QKC8 Cluster: Chromosome chr2 scaffold_112,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_112, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 523

 Score =  801 bits (404), Expect = 0.0
 Identities = 404/404 (100%)
 Strand = Plus / Minus

                                                                       
Query: 552 attgtgtgccagttttgaaggggatgggagaatgacactagcaaaaacaaacccttcaaa 611
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 attgtgtgccagttttgaaggggatgggagaatgacactagcaaaaacaaacccttcaaa 464

                                                                       
Query: 612 accttttgtttgtgctgcaaagagacatggccattttggtttagttgtggagtattattc 671
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 accttttgtttgtgctgcaaagagacatggccattttggtttagttgtggagtattattc 404

                                                                       
Query: 672 tccacctccaccagatcagttcagaaagcctataagtcagtggaaagtggcagtaggcag 731
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tccacctccaccagatcagttcagaaagcctataagtcagtggaaagtggcagtaggcag 344

                                                                       
Query: 732 taccattggtgctgcattgggtgcttttcttctaggactgcttcttgtggcaatgcttgt 791
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 taccattggtgctgcattgggtgcttttcttctaggactgcttcttgtggcaatgcttgt 284

                                                                       
Query: 792 gagggtgaagaagagatcaagaatggtggagatggagagaagggcctatgaagaagaagc 851
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gagggtgaagaagagatcaagaatggtggagatggagagaagggcctatgaagaagaagc 224

                                                                       
Query: 852 tcttcaggtgtcaatggttggacatgtgagggctcctacagcacctggcactcgaacgac 911
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tcttcaggtgtcaatggttggacatgtgagggctcctacagcacctggcactcgaacgac 164

                                                       
Query: 912 accgacaattgagcatgagtatataactcatcgtcctcgctgag 955
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 accgacaattgagcatgagtatataactcatcgtcctcgctgag 120