Miyakogusa Predicted Gene
- Lj3g3v0787230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0787230.1 tr|G7IVT5|G7IVT5_MEDTR Choline/ethanolamine
kinase OS=Medicago truncatula GN=MTR_3g013430 PE=4
SV=1,39.81,0.00000002,seg,NULL; no description,NULL; Protein
kinase-like (PK-like),Protein kinase-like domain;
CHOLINE/ETH,CUFF.41416.1
(1752 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS326566 similar to UniRef100_P49756 Cluster: Probable ... 902 0.0
gnl|LJGI|FS352883 similar to UniRef100_Q42811 Cluster: GmCK3p; n... 353 2e-96
gnl|LJGI|FS340244 similar to UniRef100_Q1S5N6 Cluster: Choline k... 210 2e-53
gnl|LJGI|TC61423 similar to UniRef100_Q42810 Cluster: GmCK2p; n=... 78 2e-13
gnl|LJGI|TC64676 similar to UniRef100_Q42810 Cluster: GmCK2p; n=... 74 3e-12
gnl|LJGI|FS340302 similar to UniRef100_Q42809 Cluster: GmCK1p; n... 60 5e-08
>gnl|LJGI|FS326566 similar to UniRef100_P49756 Cluster: Probable RNA-binding protein
25; n=3; Homo sapiens|Rep: Probable RNA-binding protein
25 - Homo sapiens (Human), partial (4%)
Length = 767
Score = 902 bits (455), Expect = 0.0
Identities = 458/459 (99%)
Strand = Plus / Plus
Query: 1 atggccgcaactgaagatcttgtgagtaatgcagctgctgctgcagagaattctgtagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atggccgcaactgaagatcttgtgagtaatgcagctgctgctgcagagaattctgtagac 368
Query: 61 catgccacaagtactacagaaaatcctataaatgacaaaagtgtcgaagaaaatcataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 369 catgccacaagtactacagaaaatcctataaatgacaaaagtgtcgaagaaaatcatgca 428
Query: 121 atagagaaagcagattcttcagaaaatgctgtgaagactaaagcacctgatggagaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atagagaaagcagattcttcagaaaatgctgtgaagactaaagcacctgatggagaaaat 488
Query: 181 ctggcaagcgaccaactaggtggtgcagaaagtcttgcaaatgaccaatcaaacggcgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctggcaagcgaccaactaggtggtgcagaaagtcttgcaaatgaccaatcaaacggcgca 548
Query: 241 gtaaataatttaaatgaccaagtaggtggttctgaagtttctgtgaatgaccaaatagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtaaataatttaaatgaccaagtaggtggttctgaagtttctgtgaatgaccaaatagaa 608
Query: 301 tttgatgaaactcctggaaagaatggagcaggtggtactggaaatcctaccagtgatcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tttgatgaaactcctggaaagaatggagcaggtggtactggaaatcctaccagtgatcct 668
Query: 361 gcaacggttgcagaaaatcctataaccgatcaagcatgtggtgtggaaaaccctgcaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gcaacggttgcagaaaatcctataaccgatcaagcatgtggtgtggaaaaccctgcaaac 728
Query: 421 gaccaaccaaatgatgcagtaaatcatgttaagaaccaa 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gaccaaccaaatgatgcagtaaatcatgttaagaaccaa 767
>gnl|LJGI|FS352883 similar to UniRef100_Q42811 Cluster: GmCK3p; n=1; Glycine max|Rep:
GmCK3p - Glycine max (Soybean), partial (28%)
Length = 717
Score = 353 bits (178), Expect = 2e-96
Identities = 187/190 (98%)
Strand = Plus / Minus
Query: 1563 ttatcatacagaaacacctcatattcttgattacaataaatatcctgctgttgaggagcg 1622
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 717 ttatcatacagaaacacctcatattcttgattacaataaatatcctgatgttgaggagcg 658
Query: 1623 tcagagatttgtgaacgaatatttaagtccctcaggtgagcaaccaagtgatagtgaatt 1682
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 657 tcagagatttgtgaaggaatatttaagttcctcaggtgagcaaccaagtgatagtgaatt 598
Query: 1683 ggagcacctacttcaagaagttgagaagtatacacttgcaaatcatctattctggggcct 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ggagcacctacttcaagaagttgagaagtatacacttgcaaatcatctattctggggcct 538
Query: 1743 ttggggaata 1752
||||||||||
Sbjct: 537 ttggggaata 528
>gnl|LJGI|FS340244 similar to UniRef100_Q1S5N6 Cluster: Choline kinase, N-terminal;
Protein kinase-like; n=1; Medicago truncatula|Rep:
Choline kinase, N-terminal; Protein kinase-like -
Medicago truncatula (Barrel medic), partial (49%)
Length = 793
Score = 210 bits (106), Expect = 2e-53
Identities = 220/258 (85%)
Strand = Plus / Plus
Query: 1495 tatgaatatgcaagttataatcctgtggcatatgatatagcaaatcacttctgtgagatg 1554
||||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||
Sbjct: 249 tatgaatattcaagttataatcctgtggcatatgatattgcaaaccacttctctgagatg 308
Query: 1555 gctgctaattatcatacagaaacacctcatattcttgattacaataaatatcctgctgtt 1614
| ||| ||||||||||| ||||| || ||| ||||||| |||| ||||||||||| | |
Sbjct: 309 gttgcgaattatcatacggaaaccccacatgttcttgactacagtaaatatcctgatttg 368
Query: 1615 gaggagcgtcagagatttgtgaacgaatatttaagtccctcaggtgagcaaccaagtgat 1674
||||||||| | ||||||||| | |||||| ||| | |||||| | ||||| |||||
Sbjct: 369 gaggagcgtaaaagatttgtgcatacatatttgagttcttcaggtcaacaacctagtgac 428
Query: 1675 agtgaattggagcacctacttcaagaagttgagaagtatacacttgcaaatcatctattc 1734
|||||| || |||| ||| || | ||||| |||||||||||||||||||||||||||||
Sbjct: 429 agtgaagtgcagcagctagttgatgaagtcgagaagtatacacttgcaaatcatctatta 488
Query: 1735 tggggcctttggggaata 1752
|||||| | |||||||||
Sbjct: 489 tggggcgtgtggggaata 506
Score = 117 bits (59), Expect = 2e-25
Identities = 101/115 (87%)
Strand = Plus / Plus
Query: 1334 aagaagttgaagccttttatttggacacaatagacaaggaaatctctattttggaaaagg 1393
||||||||||| | ||| ||||||||||||| |||||||||||||||| ||||||||| |
Sbjct: 132 aagaagttgaaacatttcatttggacacaatggacaaggaaatctctagtttggaaaatg 191
Query: 1394 aactatcaggtgcagaccaacatataggattttgccacaatgatttacaatatgg 1448
||||||| || | |||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 192 aactatcgggcactcaccaacgtatagggttttgccacaacgatttacaatatgg 246
>gnl|LJGI|TC61423 similar to UniRef100_Q42810 Cluster: GmCK2p; n=1; Glycine max|Rep:
GmCK2p - Glycine max (Soybean), partial (65%)
Length = 968
Score = 77.8 bits (39), Expect = 2e-13
Identities = 150/187 (80%)
Strand = Plus / Plus
Query: 1423 ttttgccacaatgatttacaatatggtaacataatgcttgatgaagacacccattccgtg 1482
||||| |||||||| | |||||||||||||||||| | |||||||| || || |
Sbjct: 778 ttttgtcacaatgacctgcaatatggtaacataatgatggatgaagagacaagatcacta 837
Query: 1483 accataattgactatgaatatgcaagttataatcctgtggcatatgatatagcaaatcac 1542
|| |||||||| ||||||||||| ||||| |||||| | |||||||| | ||||||||
Sbjct: 838 actataattgattatgaatatgcgagttacaatcctattgcatatgacctggcaaatcat 897
Query: 1543 ttctgtgagatggctgctaattatcatacagaaacacctcatattcttgattacaataaa 1602
|||||||| |||| ||| |||| || | || ||||||||| ||||||| |||| |||
Sbjct: 898 ttctgtgaaatggtggctgattaccacagtgacacacctcatgttcttgactacagcaaa 957
Query: 1603 tatcctg 1609
|||||||
Sbjct: 958 tatcctg 964
Score = 60.0 bits (30), Expect = 5e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 934 ttgcaggtgatccctctgaaaggggcaatgacaaatgaggtgttccagataaagtggcca 993
||||||||||| || ||||||| |||||||| |||||||| |||||| |||| ||||||
Sbjct: 289 ttgcaggtgattccattgaaaggtgcaatgaccaatgaggttttccaggtaaattggcca 348
Query: 994 ac 995
||
Sbjct: 349 ac 350
>gnl|LJGI|TC64676 similar to UniRef100_Q42810 Cluster: GmCK2p; n=1; Glycine max|Rep:
GmCK2p - Glycine max (Soybean), partial (77%)
Length = 998
Score = 73.8 bits (37), Expect = 3e-12
Identities = 148/185 (80%)
Strand = Plus / Plus
Query: 1423 ttttgccacaatgatttacaatatggtaacataatgcttgatgaagacacccattccgtg 1482
||||| |||||||| | |||||||||||||||||| | |||||||| || || |
Sbjct: 395 ttttgtcacaatgacctgcaatatggtaacataatgatggatgaagagacaagatcacta 454
Query: 1483 accataattgactatgaatatgcaagttataatcctgtggcatatgatatagcaaatcac 1542
|| |||||||| ||||||||||| ||||| |||||| | |||||||| | ||||||||
Sbjct: 455 actataattgattatgaatatgcgagttacaatcctattgcatatgacctggcaaatcat 514
Query: 1543 ttctgtgagatggctgctaattatcatacagaaacacctcatattcttgattacaataaa 1602
|||||||| |||| ||| |||| || | || ||||||||| ||||||| |||| |||
Sbjct: 515 ttctgtgaaatggtggctgattaccacagtgacacacctcatgttcttgactacagcaaa 574
Query: 1603 tatcc 1607
|||||
Sbjct: 575 tatcc 579
>gnl|LJGI|FS340302 similar to UniRef100_Q42809 Cluster: GmCK1p; n=1; Glycine max|Rep:
GmCK1p - Glycine max (Soybean), partial (42%)
Length = 701
Score = 60.0 bits (30), Expect = 5e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 934 ttgcaggtgatccctctgaaaggggcaatgacaaatgaggtgttccagataaagtggcca 993
||||||||||| || ||||||| |||||||| |||||||| |||||| |||| ||||||
Sbjct: 367 ttgcaggtgattccattgaaaggtgcaatgaccaatgaggttttccaggtaaattggcca 426
Query: 994 ac 995
||
Sbjct: 427 ac 428