Miyakogusa Predicted Gene
- Lj3g3v0755480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0755480.1 Non Chatacterized Hit- tr|A4BRK4|A4BRK4_9GAMM
Putative restriction modification enzyme M subunit OS=,30,6.2,
,CUFF.41374.1
(376 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73244 similar to UniRef100_A7P0A0 Cluster: Chromosome... 658 0.0
gnl|LJGI|BW618076 homologue to UniRef100_A7P0A0 Cluster: Chromos... 234 3e-61
gnl|LJGI|BW626490 homologue to UniRef100_A7P0A0 Cluster: Chromos... 234 3e-61
gnl|LJGI|BW605738 homologue to UniRef100_A7P0A0 Cluster: Chromos... 234 3e-61
gnl|LJGI|TC67630 similar to UniRef100_A7P0A0 Cluster: Chromosome... 234 3e-61
gnl|LJGI|TC58329 similar to UniRef100_A7P0A0 Cluster: Chromosome... 168 2e-41
>gnl|LJGI|TC73244 similar to UniRef100_A7P0A0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 562
Score = 658 bits (332), Expect = 0.0
Identities = 365/376 (97%)
Strand = Plus / Minus
Query: 1 atgtttccgaaagctccctggccagcatggtgggtacaaccaccggggacacgggggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atgtttccgaaagctccctggccagcatggtgggtacaaccaccggggacacgggggata 360
Query: 61 cgggagaaagcacgaccagttcctcaagactcggcgaagcactggtggccggcgcgacgg 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 359 cgggagaaagcacgaccagttcctcaagactcggcggagcactggtggccggcgcggcgg 300
Query: 121 gagacggcgaaaggctggcggctatttttggagatgttgaaatgggcgaaattttcgatg 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 299 gagacggcgaaaggctggcggctgtttttggagatgttgaaatgggcgaaatttccgatg 240
Query: 181 tcaggacggattgaagctctcatgacattagggatggaatggtggtggcagcatcggagg 240
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 239 tcaggaaatattgaagctctcatgacactagggatggaatggtggtggcagcatcggagg 180
Query: 241 acgcatcgtctctttttctggtggtgtggccgtggctgttgtggctcgcctggaatagag 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 179 acgcatcgtctctttttctggtggtgtggccgtggctgttttggctcgcctggaatagag 120
Query: 301 gaggatgttgtggctcgcttggaacagaggaggagacgatggtgcacaactctgtcgagg 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 119 gaggatgttgtggctcgcctggaacagaggaggagacgatggtgcacaactctgtggagg 60
Query: 361 aaggaggagccataga 376
||||||||||||||||
Sbjct: 59 aaggaggagccataga 44
>gnl|LJGI|BW618076 homologue to UniRef100_A7P0A0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 471
Score = 234 bits (118), Expect = 3e-61
Identities = 209/238 (87%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 1 atgtttccgaaagctccctggccagcatggtgggtacaaccaccggggacacgggggata 60
||||||||||| ||||||||||||||| ||||||||| |||||| || ||||||||||||
Sbjct: 431 atgtttccgaaggctccctggccagcacggtgggtaccaccaccaggaacacgggggata 372
Query: 61 cgggagaaagcacgaccagttcctcaagactcggcgaagcactggtggccggcgcgacgg 120
||||||| || ||||||||||| || ||||||||| || ||||||||||||||| |||
Sbjct: 371 cgggagacggcgcgaccagttccccaggactcggcggaggtctggtggccggcgcggcgg 312
Query: 121 gagacggcgaaaggctggcggctatttttggagatgttgaaatgggcgaaattttcgatg 180
||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||| |||||
Sbjct: 311 gagacggcgtaaggctggcggctgtttttggagatgttggaatggacgaaattgacgatg 252
Query: 181 tcaggacggattgaagctctcatgacattagggat-ggaatggtggtggcagcatcgg 237
||||||||||| || || |||||||||| ||||| |||||||| | |||||| ||||
Sbjct: 251 tcaggacggatggaggccctcatgacatcggggatgggaatggttgaggcagcgtcgg 194
>gnl|LJGI|BW626490 homologue to UniRef100_A7P0A0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 476
Score = 234 bits (118), Expect = 3e-61
Identities = 209/238 (87%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 1 atgtttccgaaagctccctggccagcatggtgggtacaaccaccggggacacgggggata 60
||||||||||| ||||||||||||||| ||||||||| |||||| || ||||||||||||
Sbjct: 390 atgtttccgaaggctccctggccagcacggtgggtaccaccaccaggaacacgggggata 331
Query: 61 cgggagaaagcacgaccagttcctcaagactcggcgaagcactggtggccggcgcgacgg 120
||||||| || ||||||||||| || ||||||||| || ||||||||||||||| |||
Sbjct: 330 cgggagacggcgcgaccagttccccaggactcggcggaggtctggtggccggcgcggcgg 271
Query: 121 gagacggcgaaaggctggcggctatttttggagatgttgaaatgggcgaaattttcgatg 180
||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||| |||||
Sbjct: 270 gagacggcgtaaggctggcggctgtttttggagatgttggaatggacgaaattgacgatg 211
Query: 181 tcaggacggattgaagctctcatgacattagggat-ggaatggtggtggcagcatcgg 237
||||||||||| || || |||||||||| ||||| |||||||| | |||||| ||||
Sbjct: 210 tcaggacggatggaggccctcatgacatcggggatgggaatggttgaggcagcgtcgg 153
>gnl|LJGI|BW605738 homologue to UniRef100_A7P0A0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 538
Score = 234 bits (118), Expect = 3e-61
Identities = 209/238 (87%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 1 atgtttccgaaagctccctggccagcatggtgggtacaaccaccggggacacgggggata 60
||||||||||| ||||||||||||||| ||||||||| |||||| || ||||||||||||
Sbjct: 404 atgtttccgaaggctccctggccagcacggtgggtaccaccaccaggaacacgggggata 345
Query: 61 cgggagaaagcacgaccagttcctcaagactcggcgaagcactggtggccggcgcgacgg 120
||||||| || ||||||||||| || ||||||||| || ||||||||||||||| |||
Sbjct: 344 cgggagacggcgcgaccagttccccaggactcggcggaggtctggtggccggcgcggcgg 285
Query: 121 gagacggcgaaaggctggcggctatttttggagatgttgaaatgggcgaaattttcgatg 180
||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||| |||||
Sbjct: 284 gagacggcgtaaggctggcggctgtttttggagatgttggaatggacgaaattgacgatg 225
Query: 181 tcaggacggattgaagctctcatgacattagggat-ggaatggtggtggcagcatcgg 237
||||||||||| || || |||||||||| ||||| |||||||| | |||||| ||||
Sbjct: 224 tcaggacggatggaggccctcatgacatcggggatgggaatggttgaggcagcgtcgg 167
>gnl|LJGI|TC67630 similar to UniRef100_A7P0A0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 1512
Score = 234 bits (118), Expect = 3e-61
Identities = 209/238 (87%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 1 atgtttccgaaagctccctggccagcatggtgggtacaaccaccggggacacgggggata 60
||||||||||| ||||||||||||||| ||||||||| |||||| || ||||||||||||
Sbjct: 366 atgtttccgaaggctccctggccagcacggtgggtaccaccaccaggaacacgggggata 307
Query: 61 cgggagaaagcacgaccagttcctcaagactcggcgaagcactggtggccggcgcgacgg 120
||||||| || ||||||||||| || ||||||||| || ||||||||||||||| |||
Sbjct: 306 cgggagacggcgcgaccagttccccaggactcggcggaggtctggtggccggcgcggcgg 247
Query: 121 gagacggcgaaaggctggcggctatttttggagatgttgaaatgggcgaaattttcgatg 180
||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||| |||||
Sbjct: 246 gagacggcgtaaggctggcggctgtttttggagatgttggaatggacgaaattgacgatg 187
Query: 181 tcaggacggattgaagctctcatgacattagggat-ggaatggtggtggcagcatcgg 237
||||||||||| || || |||||||||| ||||| |||||||| | |||||| ||||
Sbjct: 186 tcaggacggatggaggccctcatgacatcggggatgggaatggttgaggcagcgtcgg 129
>gnl|LJGI|TC58329 similar to UniRef100_A7P0A0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 1454
Score = 168 bits (85), Expect = 2e-41
Identities = 184/217 (84%)
Strand = Plus / Minus
Query: 1 atgtttccgaaagctccctggccagcatggtgggtacaaccaccggggacacgggggata 60
||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 338 atgtttccgaaagctccctggccagcacggtgggtaccgccaccgggaacacgggggata 279
Query: 61 cgggagaaagcacgaccagttcctcaagactcggcgaagcactggtggccggcgcgacgg 120
||||||| ||||| |||||||| || ||||||||| || |||||| |||||||| |||
Sbjct: 278 cgggagacggcacggccagttccccaggactcggcggaggtctggtgtccggcgcggcgg 219
Query: 121 gagacggcgaaaggctggcggctatttttggagatgttgaaatgggcgaaattttcgatg 180
||||||||| |||| || ||| |||||||| |||||| | ||| |||| || |||||
Sbjct: 218 gagacggcgtaaggttgacgggagtttttggaaatgttggagtggacgaagttgacgatg 159
Query: 181 tcaggacggattgaagctctcatgacattagggatgg 217
||||| ||||| || || |||||||||| |||||||
Sbjct: 158 tcagggcggatggaggccctcatgacatcggggatgg 122