Miyakogusa Predicted Gene

Lj3g3v0744630.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0744630.1 tr|G7JLT1|G7JLT1_MEDTR Tir-nbs-lrr resistance
protein OS=Medicago truncatula GN=MTR_4g014580 PE=4 SV,41.35,4e-17,no
description,NULL; SUBFAMILY NOT NAMED,NULL; LEUCINE-RICH
REPEAT-CONTAINING PROTEIN,NULL; L domain,CUFF.41717.1
         (718 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1;...   220   9e-57
gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ...    64   1e-09

>gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (16%)
          Length = 590

 Score =  220 bits (111), Expect = 9e-57
 Identities = 207/239 (86%)
 Strand = Plus / Plus

                                                                       
Query: 112 atctataagttgaaatctttgaaaacactcatcctttcgggttgttcaaagattgacaaa 171
           |||||| ||||||||||||||| ||| ||||||||||| ||||||||||| ||||| || 
Sbjct: 5   atctatcagttgaaatctttgacaactctcatcctttcaggttgttcaaaaattgataag 64

                                                                       
Query: 172 ctggaagaagatatagtgcaaatggaatccttgacagcattggttgccaaagacacagca 231
            ||||||||||||||||||| ||||||||||||||| || |  |||| ||||| ||||| 
Sbjct: 65  ttggaagaagatatagtgcagatggaatccttgacaacacttattgcaaaagatacagct 124

                                                                       
Query: 232 atagtagaagttccatattcaataataagatcaaaaagcattgcatacatatccctatgt 291
           |||   |||||||| ||||||||| ||||||  |||||||| | ||| |||||| |||||
Sbjct: 125 ataaaggaagttccctattcaatactaagattgaaaagcataggatatatatccttatgt 184

                                                                      
Query: 292 ggatatgaaggattatcaagtgatattttcccttctctcatttggtcttggatgtcacc 350
           ||||||||||||||| || ||||| |||| |||||||||||| ||||||||||||||||
Sbjct: 185 ggatatgaaggattaacacgtgatgtttttccttctctcattcggtcttggatgtcacc 243



 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 504 ctcggggattcaactaacacaagaattaagaagatttcttgatgatcaatatgatg 559
           ||||| ||||||| |||| ||||| | ||||||| || ||||||||||||||||||
Sbjct: 373 ctcggagattcaagtaactcaagagtcaagaagaattattgatgatcaatatgatg 428


>gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
           truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
           (Barrel medic), partial (5%)
          Length = 575

 Score = 63.9 bits (32), Expect = 1e-09
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 296 atgaaggattatcaagtgatattttcccttctctcatttggtcttggatgtcacca 351
           |||||||||| ||| ||||| | || |||||| |||||||||||||||||||||||
Sbjct: 13  atgaaggattctcacgtgatgtgtttccttctatcatttggtcttggatgtcacca 68