Miyakogusa Predicted Gene
- Lj3g3v0741510.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0741510.2 Non Chatacterized Hit- tr|I1KZ15|I1KZ15_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26653 PE,75.63,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; BASIC,CUFF.41697.2
(951 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74742 similar to UniRef100_A7Q723 Cluster: Chromosome... 1076 0.0
gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome... 391 e-108
gnl|LJGI|TC67061 180 1e-44
gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosom... 62 7e-09
gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BE... 62 7e-09
gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BE... 56 4e-07
>gnl|LJGI|TC74742 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 739
Score = 1076 bits (543), Expect = 0.0
Identities = 549/551 (99%)
Strand = Plus / Plus
Query: 401 gggagaaaattagtgagaggatgaagcttctccaagatcttgtacctggttgtaataagg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggagaaaattagtgagaggatgaagcttctccaagatcttgtacctggttgtaataagg 60
Query: 461 ttactgggaaggcactcatgcttgatgagattataaactatgttcagtcattgcaacgcc 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttactgggaaggcactcatgcttgatgagattataaactatgttcagtcattgcaacgcc 120
Query: 521 aagtagagttcctttctatgaaattggcatcagttaacaccagggtggattttagtattg 580
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtagagtttctttctatgaaattggcatcagttaacaccagggtggattttagtattg 180
Query: 581 agagtcttatctcaaaagatatgtttcaatcaaatagttctttggcaaacacaacatttc 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagtcttatctcaaaagatatgtttcaatcaaatagttctttggcaaacacaacatttc 240
Query: 641 cactagattcctcagcactagccttttatggacaccagcctcagcaaaactcagctatcc 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cactagattcctcagcactagccttttatggacaccagcctcagcaaaactcagctatcc 300
Query: 701 ataataacaacattcctaatagaattgtggacccattagattcctctttgtgccaaaatc 760
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 ataataacaacattcctaatagaattgtggacccattagattcctctttgtaccaaaatc 360
Query: 761 ttggcttgcatttacctcccctaaatggatccaatgaaggtgcctctcagtttccattaa 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttggcttgcatttacctcccctaaatggatccaatgaaggtgcctctcagtttccattaa 420
Query: 821 cattctgtgaggatgacctcaacaccattgttcagatggggtttggccaaattgcaaaca 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cattctgtgaggatgacctcaacaccattgttcagatggggtttggccaaattgcaaaca 480
Query: 881 ggaaaacaccagtacagacccagaatttcaacggttcaaatcaagagtcacatatgaaaa 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaaaacaccagtacagacccagaatttcaacggttcaaatcaagagtcacatatgaaaa 540
Query: 941 ttgagctatga 951
|||||||||||
Sbjct: 541 ttgagctatga 551
>gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1046
Score = 391 bits (197), Expect = e-108
Identities = 350/401 (87%)
Strand = Plus / Plus
Query: 308 caaaacctcctgagcctccaaaagattacattcatgtcagagcaagaagaggtcaagcca 367
|||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |
Sbjct: 31 caaaacctcctgagccaccaaaggattacattcatgtgagagcaagaagaggtcaagcta 90
Query: 368 ctgacagccacagtcttgctgaacgtgtacgaagggagaaaattagtgagaggatgaagc 427
|||| ||||| |||||||| ||| | || |||||||||||||| ||||| ||||||||||
Sbjct: 91 ctgatagccatagtcttgcggaaagagttcgaagggagaaaatcagtgaaaggatgaagc 150
Query: 428 ttctccaagatcttgtacctggttgtaataaggttactgggaaggcactcatgcttgatg 487
| |||||||||||||| || ||||| |||||||| ||||| || ||||| ||||||||||
Sbjct: 151 tgctccaagatcttgttccaggttgcaataaggtcactggaaaagcacttatgcttgatg 210
Query: 488 agattataaactatgttcagtcattgcaacgccaagtagagttcctttctatgaaattgg 547
| |||||||||||||| ||||||||||| || ||||| |||||||| ||||||||||||
Sbjct: 211 aaattataaactatgtccagtcattgcagcgtcaagttgagttcctatctatgaaattgt 270
Query: 548 catcagttaacaccagggtggattttagtattgagagtcttatctcaaaagatatgtttc 607
| || |||||||||||| |||||||||| | ||| ||||| |||||||||||||| ||||
Sbjct: 271 cttctgttaacaccaggctggattttagcactgaaagtctaatctcaaaagatatatttc 330
Query: 608 aatcaaatagttctttggcaaacacaacatttccactagattcctcagcactagcctttt 667
||||||||| |||||||||| | || ||| ||||||||||||| || | ||||||||
Sbjct: 331 aatcaaataattctttggcacaaccattattcccactagattcctgggcgcgagcctttt 390
Query: 668 atggacaccagcctcagcaaaactcagctatccataataac 708
|||| || ||||| |||||||||||||| ||||| ||||||
Sbjct: 391 atgggcaacagccacagcaaaactcagcaatccacaataac 431
Score = 117 bits (59), Expect = 1e-25
Identities = 122/143 (85%)
Strand = Plus / Plus
Query: 749 tgtgccaaaatcttggcttgcatttacctcccctaaatggatccaatgaaggtgcctctc 808
|||||||||| |||||| |||| |||| ||| |||||||| |||||||||| |||||
Sbjct: 487 tgtgccaaaaccttggcatgcagttacttccactaaatgggattaatgaaggtggctctc 546
Query: 809 agtttccattaacattctgtgaggatgacctcaacaccattgttcagatggggtttggcc 868
|||||||| |||| |||| ||| ||||||||| ||||||| ||||| ||||| ||||| |
Sbjct: 547 agtttccactaacgttctctgaagatgacctccacaccatagttcaaatgggatttggtc 606
Query: 869 aaattgcaaacaggaaaacacca 891
||| |||||| ||||||||||||
Sbjct: 607 aaactgcaaataggaaaacacca 629
>gnl|LJGI|TC67061
Length = 632
Score = 180 bits (91), Expect = 1e-44
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 atggaagtggcaaattctcaagaggaatctacaatctctgagcaaaccccaaatggggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atggaagtggcaaattctcaagaggaatctacaatctctgagcaaaccccaaatggggaa 601
Query: 61 ttaggtgtgaaagcttctgataccaatccca 91
|||||||||||||||||||||||||||||||
Sbjct: 602 ttaggtgtgaaagcttctgataccaatccca 632
>gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 526
Score = 61.9 bits (31), Expect = 7e-09
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 412 agtgagaggatgaagcttctccaagatcttgtacctggttgtaataaggttactgggaag 471
||||||||||||||| | || ||||||||||||||||| || | ||||| ||||| |||
Sbjct: 185 agtgagaggatgaagttccttcaagatcttgtacctggatgcagcaaggtcactggcaag 244
Query: 472 gcactcatgcttgatgagattataaactatgttcagtca 510
|| | ||||| ||||| || || |||||||| ||||||
Sbjct: 245 gctgtgatgctagatgaaatcatcaactatgtacagtca 283
>gnl|LJGI|TC66245 similar to UniRef100_Q8GZ13 Cluster: Protein BEE 1; n=1;
Arabidopsis thaliana|Rep: Protein BEE 1 - Arabidopsis
thaliana (Mouse-ear cress), partial (39%)
Length = 998
Score = 61.9 bits (31), Expect = 7e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 484 gatgagattataaactatgttcagtcattgcaacgccaagtagagttcctttctatgaa 542
|||||||| ||||||||||| ||||| ||||||| ||||| |||||||| ||||||||
Sbjct: 645 gatgagatcataaactatgtccagtccttgcaacatcaagtggagttcctctctatgaa 703
>gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BEE 3; n=1;
Arabidopsis thaliana|Rep: Protein BEE 3 - Arabidopsis
thaliana (Mouse-ear cress), partial (41%)
Length = 1161
Score = 56.0 bits (28), Expect = 4e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 338 ttcatgtcagagcaagaagaggtcaagccactgacagccacagt 381
||||||||||||| |||||||||||||| ||||| || ||||||
Sbjct: 504 ttcatgtcagagccagaagaggtcaagctactgatagtcacagt 547