Miyakogusa Predicted Gene
- Lj3g3v0730440.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0730440.1 Non Chatacterized Hit- tr|I1MMM4|I1MMM4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21522
PE,83.62,0,Gpi16,Gpi16 subunit, GPI transamidase component; seg,NULL;
GPI TRANSAMIDASE COMPONENT PIG-T,NULL; GP,CUFF.41247.1
(1986 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS328471 similar to UniRef100_A7PU42 Cluster: Chromosom... 910 0.0
gnl|LJGI|TC76714 homologue to UniRef100_A7PU42 Cluster: Chromoso... 607 e-172
gnl|LJGI|TC72796 78 2e-13
>gnl|LJGI|FS328471 similar to UniRef100_A7PU42 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 622
Score = 910 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Plus
Query: 68 cgattccgtcgccggcggcgggcgcagaagaagaagagttttccgaggaattgctactga 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 cgattccgtcgccggcggcgggcgcagaagaagaagagttttccgaggaattgctactga 223
Query: 128 agccgttacccgatcgcaaagtactcgcgcatttccatttccaaagcgaagctcctctcg 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 agccgttacccgatcgcaaagtactcgcgcatttccatttccaaagcgaagctcctctcg 283
Query: 188 ctgaacactccttcgcccgtcaccaccatctcttccccaaatcgattgcgcaactggtta 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctgaacactccttcgcccgtcaccaccatctcttccccaaatcgattgcgcaactggtta 343
Query: 248 agaaatttcatattaaagcaatggagttatctttcacacaaggtcggtggaactatgaaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agaaatttcatattaaagcaatggagttatctttcacacaaggtcggtggaactatgaaa 403
Query: 308 gatggggtggatttgacccaatatcaagccgcaatgctaagcctcctggagttgaattgt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gatggggtggatttgacccaatatcaagccgcaatgctaagcctcctggagttgaattgt 463
Query: 368 gggctgtctttgatgtccctctagaccaggttgatgcttcttggaaaaatttaacccatt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gggctgtctttgatgtccctctagaccaggttgatgcttcttggaaaaatttaacccatt 523
Query: 428 ctctgtcaggtctcttctgtgcttcaatcaacttcctagagtcttctacctcttattctg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctctgtcaggtctcttctgtgcttcaatcaacttcctagagtcttctacctcttattctg 583
Query: 488 ctcctaaatgggcatttcaatcagctttaggcagtttaa 526
|||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctcctaaatgggcatttcaatcagctttaggcagtttaa 622
Score = 54.0 bits (27), Expect = 3e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 atggctctcttaatcaaaccttgcctc 27
|||||||||||||||||||||||||||
Sbjct: 97 atggctctcttaatcaaaccttgcctc 123
>gnl|LJGI|TC76714 homologue to UniRef100_A7PU42 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 513
Score = 607 bits (306), Expect = e-172
Identities = 321/326 (98%)
Strand = Plus / Plus
Query: 1660 tacacagaagttttgcttgtaccattgacaactcctgatttcagtatgccttataatgtc 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tacacagaagttttgcttgtaccattgacaactcctgatttcagtatgccttataatgtc 60
Query: 1720 attacaatcacatgcacaatttttgcattgtattttggatctttgctaaatgtactccgg 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attacaatcacatgcacaatttttgcattgtattttggatctttgctaaatgtactccgg 120
Query: 1780 agacgagttggagaggaggaaagacttttgaaaaacaaagatgcaaccaaaggtgcgttc 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agacgagttggagaggaggaaagacttttgaaaaacaaagatgcaaccaaaggtgcgttc 180
Query: 1840 cttcgtcgagtattaactaaattatcttccaagcttagagggagatcaccggaatctact 1899
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
Sbjct: 181 ctttgtcgagtattaactaaattattttccaagcttagagggagatcaccggaatttatt 240
Query: 1900 caaccacgatcatcattatccttcattactccaaaattgattcttagagtactagtggtt 1959
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 caaccacgatcatcattatccttcattactccaaaattgatttttagagtactagtggtt 300
Query: 1960 gcaggaattgcagttgcatggcacta 1985
||||||||||||||||||||||||||
Sbjct: 301 gcaggaattgcagttgcatggcacta 326
>gnl|LJGI|TC72796
Length = 526
Score = 77.8 bits (39), Expect = 2e-13
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 166 ttccaaagcgaagctcctctcgctgaacactccttcgcccgtcaccaccatctcttcccc 225
||||||||||||||| |||| ||||| || |||||||| | ||||||| |||||||||||
Sbjct: 117 ttccaaagcgaagcttctcttgctgagcaatccttcgctcttcaccacaatctcttcccc 58
Query: 226 aaatcgattgc 236
||||| |||||
Sbjct: 57 aaatcaattgc 47