Miyakogusa Predicted Gene
- Lj3g3v0719990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0719990.1 tr|A9SEY9|A9SEY9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233124,32.14,0.000000000008,Tim17,Mitochondrial inner
membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein
PMP24; ,CUFF.41215.1
(627 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78039 similar to UniRef100_A7QZ83 Cluster: Chromosome... 1227 0.0
gnl|LJGI|DC600044 similar to UniRef100_A7QZ83 Cluster: Chromosom... 474 e-133
gnl|LJGI|BP084574 similar to UniRef100_A8IQQ3 Cluster: Peptide A... 58 7e-08
>gnl|LJGI|TC78039 similar to UniRef100_A7QZ83 Cluster: Chromosome undetermined
scaffold_267, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_267,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (63%)
Length = 893
Score = 1227 bits (619), Expect = 0.0
Identities = 625/627 (99%)
Strand = Plus / Plus
Query: 1 atgggttctgagaatcaaggaacccctgatcctgatggagtagaaatcaacgctttgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atgggttctgagaatcaaggaacccctgatcctgatggagtagaaatcaacgctttgcct 109
Query: 61 ccttcaccctcatcttcatcaaattcctggacaactcgaatcttcattccaaccctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ccttcaccctcatcttcatcaaattcctggacaactcgaatcttcattccaaccctcctt 169
Query: 121 gcagggcttgctggtgctggaactggcttaatctcaaagcatcgaaaaactcttggactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gcagggcttgctggtgctggaactggcttaatctcaaagcatcgaaaaactcttggactt 229
Query: 181 gccaacgtttgtgccagctacgctgctaatttctccattgttaccggttgctactgcggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gccaacgtttgtgccagctacgctgctaatttctccattgttaccggttgctactgcggg 289
Query: 241 gcacgtgaatttgcgattgcaactagaaaaacaggacctgaggatctatggagttctgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcacgtgaatttgcgattgcaactagaaaaacaggacctgaggatctatggagttctgca 349
Query: 301 atagcgggatttggatctggtgctcttctagggcgtctgtacggaggtcatcttggagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 atagcgggatttggatctggtgctcttctagggcgtctgtacggaggtcatcttggagcc 409
Query: 361 ctccgatactccgtgatctttgcagttgtggggacttcagcagattttgctattctgaaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 410 ctccgatactccgtgatctttgcagttgtggggacttcagcagattttgctattttgaaa 469
Query: 421 ttgaaagatgttatcagagatcagaataaaacaatatatcaacatatagagaattcaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttgaaagatgttatcagagatcagaataaaacaatatatcaacatatagagaattcaaag 529
Query: 481 aagagtggaaatttgttaagattgccagaatggttcccgattcgagtacttgatgaggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aagagtggaaatttgttaagattgccagaatggttcccgattcgagtacttgatgaggaa 589
Query: 541 gcccttgctgaaaaacgagcgcaggaagagcagttccttgcccagagggcaaggattcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 590 gcccttgctgaaaaacgagcgcaggaagagcagttccttgcccagagggcaaggatttgt 649
Query: 601 agcctgaaggaagaagaatcttgattg 627
|||||||||||||||||||||||||||
Sbjct: 650 agcctgaaggaagaagaatcttgattg 676
>gnl|LJGI|DC600044 similar to UniRef100_A7QZ83 Cluster: Chromosome undetermined
scaffold_267, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_267,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 578
Score = 474 bits (239), Expect = e-133
Identities = 239/239 (100%)
Strand = Plus / Plus
Query: 1 atgggttctgagaatcaaggaacccctgatcctgatggagtagaaatcaacgctttgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atgggttctgagaatcaaggaacccctgatcctgatggagtagaaatcaacgctttgcct 106
Query: 61 ccttcaccctcatcttcatcaaattcctggacaactcgaatcttcattccaaccctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ccttcaccctcatcttcatcaaattcctggacaactcgaatcttcattccaaccctcctt 166
Query: 121 gcagggcttgctggtgctggaactggcttaatctcaaagcatcgaaaaactcttggactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gcagggcttgctggtgctggaactggcttaatctcaaagcatcgaaaaactcttggactt 226
Query: 181 gccaacgtttgtgccagctacgctgctaatttctccattgttaccggttgctactgcgg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gccaacgtttgtgccagctacgctgctaatttctccattgttaccggttgctactgcgg 285
>gnl|LJGI|BP084574 similar to UniRef100_A8IQQ3 Cluster: Peptide ABC transporter
ATP-binding protein; n=1; Azorhizobium caulinodans ORS
571|Rep: Peptide ABC transporter ATP-binding protein -
Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 /
ORS 571), partial (5%)
Length = 336
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/40 (95%), Gaps = 2/40 (5%)
Strand = Plus / Minus
Query: 590 caaggattcgtagc--ctgaaggaagaagaatcttgattg 627
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 caaggattcgtagcnnctgaaggaagaagaatcttgattg 222