Miyakogusa Predicted Gene
- Lj3g3v0718540.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0718540.2 Non Chatacterized Hit- tr|I1K261|I1K261_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,71.47,0,ZF_BED,Zinc finger, BED-type predicted; zf-BED,Zinc
finger, BED-type predicted; SUBFAMILY NOT NAMED,,CUFF.41180.2
(1348 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS319791 weakly similar to UniRef100_A8R0R4 Cluster: NA... 1063 0.0
gnl|LJGI|FS343165 homologue to UniRef100_A4FBL6 Cluster: Transcr... 642 0.0
gnl|LJGI|TC76484 weakly similar to UniRef100_Q9LS83 Cluster: Sim... 496 e-139
gnl|LJGI|GO036389 weakly similar to UniRef100_A0D0L0 Cluster: Ch... 398 e-110
gnl|LJGI|TC62938 similar to UniRef100_Q56PC0 Cluster: RPGR; n=1;... 333 2e-90
gnl|LJGI|GO040765 325 4e-88
gnl|LJGI|BW595851 70 4e-11
>gnl|LJGI|FS319791 weakly similar to UniRef100_A8R0R4 Cluster: NADH dehydrogenase
subunit 3; n=1; Diphyllobothrium nihonkaiense|Rep: NADH
dehydrogenase subunit 3 - Diphyllobothrium nihonkaiense,
partial (16%)
Length = 737
Score = 1063 bits (536), Expect = 0.0
Identities = 562/572 (98%), Gaps = 2/572 (0%)
Strand = Plus / Plus
Query: 1 atggcttctgcacttgagaacaatgaaccggtttcaaccaatcctgttgttatggctgtg 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 168 atggcttctgcacttgagaacaatgaaccggtttcaaccaatcct--tgttatggctgtg 225
Query: 61 gatgaacttgtccaacccgattcgagtcagctacaagaaaatgaacaaggaaatgatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gatgaacttgtccaacccgattcgagtcagctacaagaaaatgaacaaggaaatgatcta 285
Query: 121 gtaggcgaagaggcggttgtcaagagaaagaggaagaaaacatcatctgtttgggaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtaggcgaagaggcggttgtcaagagaaagaggaagaaaacatcatctgtttgggaagat 345
Query: 181 ttttatgaagttaaccttgtcggaggtaaaatgaaagctgtttgcaagtattgcaaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttttatgaagttaaccttgtcggaggtaaaatgaaagctgtttgcaagtattgcaaacaa 405
Query: 241 aaatttgcaactagtggagtaggggctagtactagccatttgagaaggcatggagaagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aaatttgcaactagtggagtaggggctagtactagccatttgagaaggcatggagaagtt 465
Query: 301 tgcacacaaaagtcgctgcagaaggctagtgnnnnnnngcagagtgtcattccttttcag 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 466 tgcacacaaaagtcgctgcagaaggctagtgaaaaaaagcagagtgtcattccttttcag 525
Query: 361 ccttctaatggtaatccatttataatatctggtgctagatacaacaatgaaaagatgagg 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 526 ccttctaatggtaatccatttataatatctggtgctagatacagcaatgaaaagatgagg 585
Query: 421 gagataattgcttctgcgataatggttcatgaaatgccttttaatgttgttgaagatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gagataattgcttctgcgataatggttcatgaaatgccttttaatgttgttgaagatgaa 645
Query: 481 gtttggatgtgggcattccagtatgcaaattctgattttacaaaggtgactcgtaagact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gtttggatgtgggcattccagtatgcaaattctgattttacaaaggtgactcgtaagact 705
Query: 541 attagaaaagattgtttagcattgtatgaggc 572
||||||||||||||||||||||||||||||||
Sbjct: 706 attagaaaagattgtttagcattgtatgaggc 737
>gnl|LJGI|FS343165 homologue to UniRef100_A4FBL6 Cluster: Transcriptional regulator,
DeoR family; n=1; Saccharopolyspora erythraea NRRL
2338|Rep: Transcriptional regulator, DeoR family -
Saccharopolyspora erythraea (strain NRRL 23338), partial
(6%)
Length = 727
Score = 642 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Plus
Query: 1 atggcttctgcacttgagaacaatgaaccggtttcaaccaatcctgttgttatggctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atggcttctgcacttgagaacaatgaaccggtttcaaccaatcctgttgttatggctgtg 262
Query: 61 gatgaacttgtccaacccgattcgagtcagctacaagaaaatgaacaaggaaatgatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gatgaacttgtccaacccgattcgagtcagctacaagaaaatgaacaaggaaatgatcta 322
Query: 121 gtaggcgaagaggcggttgtcaagagaaagaggaagaaaacatcatctgtttgggaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtaggcgaagaggcggttgtcaagagaaagaggaagaaaacatcatctgtttgggaagat 382
Query: 181 ttttatgaagttaaccttgtcggaggtaaaatgaaagctgtttgcaagtattgcaaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttttatgaagttaaccttgtcggaggtaaaatgaaagctgtttgcaagtattgcaaacaa 442
Query: 241 aaatttgcaactagtggagtaggggctagtactagccatttgagaaggcatggagaagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaatttgcaactagtggagtaggggctagtactagccatttgagaaggcatggagaagtt 502
Query: 301 tgcacacaaaagtcgctgcagaag 324
||||||||||||||||||||||||
Sbjct: 503 tgcacacaaaagtcgctgcagaag 526
>gnl|LJGI|TC76484 weakly similar to UniRef100_Q9LS83 Cluster: Similarity to Ac-like
transposase; n=1; Arabidopsis thaliana|Rep: Similarity to
Ac-like transposase - Arabidopsis thaliana (Mouse-ear
cress), partial (6%)
Length = 882
Score = 496 bits (250), Expect = e-139
Identities = 250/250 (100%)
Strand = Plus / Plus
Query: 993 tttcaatgttcgtgaaagtgtaaaatacatcaactacaatgatgcaagattaaagaactt 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcaatgttcgtgaaagtgtaaaatacatcaactacaatgatgcaagattaaagaactt 60
Query: 1053 ttgtgatgtggttgaacagaagcgtttgaaagagaggaagcttatcatggattgcccaac 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtgatgtggttgaacagaagcgtttgaaagagaggaagcttatcatggattgcccaac 120
Query: 1113 aagatggaattcaacatttcgtatgttggcaactgctttgaaattcaagactgcatttga 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagatggaattcaacatttcgtatgttggcaactgctttgaaattcaagactgcatttga 180
Query: 1173 tgcttacaaggaaagagagccccattatgattatacaccttcatctgaagattggagcaa 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcttacaaggaaagagagccccattatgattatacaccttcatctgaagattggagcaa 240
Query: 1233 agttgagaag 1242
||||||||||
Sbjct: 241 agttgagaag 250
>gnl|LJGI|GO036389 weakly similar to UniRef100_A0D0L0 Cluster: Chromosome undetermined
scaffold_33, whole genome shotgun sequence; n=1;
Paramecium tetraurelia|Rep: Chromosome undetermined
scaffold_33, whole genome shotgun sequence - Paramecium
tetraurelia, partial (9%)
Length = 693
Score = 398 bits (201), Expect = e-110
Identities = 271/294 (92%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 5 cttctgcacttgagaacaatgaaccggtttcaaccaatcctgttgttatggctgtggatg 64
||||| ||||| ||| |||||||| | |||||||||||||||||||| |||||||||
Sbjct: 283 cttctccacttaagagcaatgaactgatttcaaccaatcctgttgtt----ctgtggatg 338
Query: 65 aacttgtccaacccgattcgagtcagctacaagaaaatgaacaaggaaatgatctagtag 124
||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 339 aacctgtccaaccagatttgagtcagctacaagaaactgaacaaggaaatgatcaagtag 398
Query: 125 gcgaagaggcggttgtcaagagaaagaggaagaaaacatcatctgtttgggaagattttt 184
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 399 gcgaagaggcggttgtcaagagaaagaggaagaaaacatcgtctgtttaggaagattttt 458
Query: 185 atgaagttaaccttgtcggaggtaaaatgaaagctgtttgcaagtattgcaaacaaaaat 244
|||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 459 gtgaagttaaccttgccggaggtacaaagaaagttgtttgcaagtattgcaaacaaaaat 518
Query: 245 ttgcaactagtggagtaggggctagtactagccatttgagaaggcatggagaag 298
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 519 ttgcaactggtggagtaggggctagtactaaccatttgagaaggcatggagaag 572
>gnl|LJGI|TC62938 similar to UniRef100_Q56PC0 Cluster: RPGR; n=1; Felis catus|Rep:
RPGR - Felis silvestris catus (Cat), partial (3%)
Length = 774
Score = 333 bits (168), Expect = 2e-90
Identities = 268/302 (88%), Gaps = 12/302 (3%)
Strand = Plus / Plus
Query: 5 cttctgcacttgagaacaatgaaccggtttcaaccaatcctgttgttatggctgtggatg 64
||||| ||||| ||| |||||||| ||||||||||||| ||||||| ||||||||
Sbjct: 276 cttctccacttaagagcaatgaactggtttcaaccaattatgttgtt----ttgtggatg 331
Query: 65 aacttgtccaacccgattcgagtcagctacaagaaaatgaacaaggaaatgatctagtag 124
||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 332 aacctgtccaaccagatttgagtcagctacaagaaactgaacaaggaaatgatcaagtag 391
Query: 125 gcgaagaggcggttgtcaagagaaagaggaagaaaacatcatctgtttgggaagattttt 184
||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 392 gcgaagaggcggtgatcaagagaaagaggaagaaaacatcgtctgttcgggaagattttt 451
Query: 185 atgaagttaaccttgtcggaggtaaaatgaaagctgtttgcaagtattgcaaacaaaaat 244
|||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 452 atgaagttaaccttgtcggaggtacaaagaaagctgtttgcaagtattgcaaacaaaaaa 511
Query: 245 ttgcaactagtggagtaggggcta--------gtactagccatttgagaaggcatggaga 296
||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 512 atgcaactggtggagtaggggctaatactactatactagccatttgagaaggcatggaga 571
Query: 297 ag 298
||
Sbjct: 572 ag 573
>gnl|LJGI|GO040765
Length = 657
Score = 325 bits (164), Expect = 4e-88
Identities = 267/302 (88%), Gaps = 12/302 (3%)
Strand = Plus / Minus
Query: 5 cttctgcacttgagaacaatgaaccggtttcaaccaatcctgttgttatggctgtggatg 64
||||| ||||| ||| |||||||| ||||||||||||| ||||||| ||||||||
Sbjct: 364 cttctccacttaagagcaatgaactggtttcaaccaattatgttgtt----ttgtggatg 309
Query: 65 aacttgtccaacccgattcgagtcagctacaagaaaatgaacaaggaaatgatctagtag 124
||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 308 aacctgtccaaccagatttgagtcagctacaagaaactgaacaaggaaatgatcaagtag 249
Query: 125 gcgaagaggcggttgtcaagagaaagaggaagaaaacatcatctgtttgggaagattttt 184
|||||||| |||| ||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 248 gcgaagagacggtgatcaagagaaagaggaagaaaacatcgtctgttcgggaagattttt 189
Query: 185 atgaagttaaccttgtcggaggtaaaatgaaagctgtttgcaagtattgcaaacaaaaat 244
|||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 188 atgaagttaaccttgtcggaggtacaaagaaagctgtttgcaagtattgcaaacaaaaaa 129
Query: 245 ttgcaactagtggagtaggggcta--------gtactagccatttgagaaggcatggaga 296
||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 128 atgcaactggtggagtaggggctaatactactatactagccatttgagaaggcatggaga 69
Query: 297 ag 298
||
Sbjct: 68 ag 67
>gnl|LJGI|BW595851
Length = 484
Score = 69.9 bits (35), Expect = 4e-11
Identities = 122/151 (80%)
Strand = Plus / Plus
Query: 141 caagagaaagaggaagaaaacatcatctgtttgggaagatttttatgaagttaaccttgt 200
||||| |||||||||||||||||| | ||||||| ||||||| ||||| || | ||
Sbjct: 297 caagaaaaagaggaagaaaacatctgcggtttgggcagattttgatgaaattgaaattac 356
Query: 201 cggaggtaaaatgaaagctgtttgcaagtattgcaaacaaaaatttgcaactagtggagt 260
||||||| || |||||| ||||||| ||||||||| ||||| |||| || |||||
Sbjct: 357 cggaggtgcaaagaaagcagtttgcagatattgcaaagaaaaaattgctacaggtggaaa 416
Query: 261 aggggctagtactagccatttgagaaggcat 291
||||| |||||||||||| ||| |||||||
Sbjct: 417 aggggacagtactagccatctgaaaaggcat 447