Miyakogusa Predicted Gene

Lj3g3v0718390.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0718390.2 CUFF.41176.2
         (459 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75860                                                      448   e-125

>gnl|LJGI|TC75860 
          Length = 1167

 Score =  448 bits (226), Expect = e-125
 Identities = 236/238 (99%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttgtatcgtgcttgccacagatcgtttttgggctcgtcgtctatgcccgatatgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atggttgtatcgtgcttgccacagatcgtttttgggctcgtcgtctatgcccgatatgcc 395

                                                                       
Query: 61  ttagatatgttctttctcagatctgatcctttgttctccttcacaggtccgcgtggtgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttagatatgttctttctcagatctgatcctttgttctccttcacaggtccgcgtggtgga 455

                                                                       
Query: 121 gttctcaggacagtggtt-gggtggtttttcttgttgtggtgcgtcgctagttgtgggtc 179
           |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 456 gttctcaggacagtggttggggtggtttttcttgttgtggtgcgtccctagttgtgggtc 515

                                                                     
Query: 180 gttccttttgagcagtgacgaagggtgggctcagacttgcttcgtatggcggtggcgg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gttccttttgagcagtgacgaagggtgggctcagacttgcttcgtatggcggtggcgg 573



 Score =  444 bits (224), Expect = e-124
 Identities = 224/224 (100%)
 Strand = Plus / Plus

                                                                       
Query: 236 ggcgaggcatggttgatttgagtcgatgtagagcccggtttgtgtttgggttttcagatg 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ggcgaggcatggttgatttgagtcgatgtagagcccggtttgtgtttgggttttcagatg 766

                                                                       
Query: 296 cccctgctaccatggttcgtgctgtgaagatgtttgctggatccgttttggtcgatctta 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 cccctgctaccatggttcgtgctgtgaagatgtttgctggatccgttttggtcgatctta 826

                                                                       
Query: 356 tcgtcacttctgtttcttgttttttgaggccttggatggttattcttttttgttcctgtt 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 tcgtcacttctgtttcttgttttttgaggccttggatggttattcttttttgttcctgtt 886

                                                       
Query: 416 tgcttaggctttgggtcccagctatatggagtgtggttctctga 459
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 tgcttaggctttgggtcccagctatatggagtgtggttctctga 930