Miyakogusa Predicted Gene
- Lj3g3v0718220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0718220.1 tr|C1EEL0|C1EEL0_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_103168,31.46,0.00000000000004,SANT SWI3, ADA2, N-CoR and
TFIIIB'' DNA-bin,SANT/Myb domain; SUBFAMILY NOT NAMED,NULL; MYB-LIKE
DNA,CUFF.41153.1
(1317 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO028718 weakly similar to UniRef100_A7NZN4 Cluster: Ch... 700 0.0
gnl|LJGI|TC65528 similar to UniRef100_Q9LW95 Cluster: KED; n=1; ... 367 e-100
>gnl|LJGI|GO028718 weakly similar to UniRef100_A7NZN4 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 899
Score = 700 bits (353), Expect = 0.0
Identities = 423/445 (95%), Gaps = 1/445 (0%)
Strand = Plus / Minus
Query: 867 ggatgaggggcgtaagtggacacctgaagagcttgattttttactcaaggcccaggatca 926
|||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||
Sbjct: 880 ggatgaggcgcgtaagtggacacctggagagctcgattttt-actcaaggcccaggatca 822
Query: 927 acatggaagtgattggaaattaattgctgagggtttaaataaacatcgtcttcatgtgaa 986
||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||
Sbjct: 821 acatggaagtgattggaaattaattgcagaagctttaaataaacatcgtcttcatgtgaa 762
Query: 987 agatacatggcggagaataagacgaaccaatgcaaacaaaggacgttggtcccaagatga 1046
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 761 ggatacatggcggagaataagacgaaccaatgcaaacacaggacgttggtcccaagatga 702
Query: 1047 gcatcaaaggctatttgatttagtaaacaaagatctatgcgcaagagctgcagaggattg 1106
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gtatcaaaggttatttgatttagtaaacaaagatctatgcgcaagagctgcagaggattg 642
Query: 1107 tagaaaaacaaaacatggtatgttgcgagataatgttagttgggaggcaatcagtgacga 1166
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 641 tagaaaaaataaacacggtatgttgcgagataatgttagttgggaggcaatcagtgatga 582
Query: 1167 gtttggcactagagctattgcactgtgctgcatgaagtggtatcagcaattaacttcacc 1226
||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 581 gtttggctctagagctagtgcattgtgctgcatgaagtggtatcagcaattaacatcacc 522
Query: 1227 aatggttgctgatggtatctggagtgatagtgatgactaccgcctgctgaatgctttata 1286
|||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||
Sbjct: 521 aatggttgctgatggtatatggagtgatactgatgactaccgcctggtgaatgctttata 462
Query: 1287 tgctttggatgcttgctccatggag 1311
|||||||||||||||||||||||||
Sbjct: 461 tgctttggatgcttgctccatggag 437
>gnl|LJGI|TC65528 similar to UniRef100_Q9LW95 Cluster: KED; n=1; Nicotiana
tabacum|Rep: KED - Nicotiana tabacum (Common tobacco),
partial (6%)
Length = 724
Score = 367 bits (185), Expect = e-100
Identities = 229/243 (94%), Gaps = 3/243 (1%)
Strand = Plus / Plus
Query: 30 gaaactgagtgaagaaaccaaaccagatgaccgaggcaaggagatgaaaaagaataagaa 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaaactgagtgaagaaaccaaaccagatgaccgaggcaaggagatgaaaaagaataagaa 452
Query: 90 ggagaaactaattgaagaaagcgaaagtaaggaagagtatgacaagttgagaagcaatga 149
|||||||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||
Sbjct: 453 ggagaaactaattgaagaaagcaaaagtgaggaagagtataaccagttgagaagcaatga 512
Query: 150 aggtgcagatggtgaccaaggcaagaagat---gaagaaaaagaagctgagtgacaagag 206
||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 513 aggtgaagatggtgaccaaggcaagaggatgaagaagaaaaagaagctgagtgacaagag 572
Query: 207 caaaagtaagaacagcgagtttaaaagcaatgaaggcgaagatgatgaacgaggcaagga 266
||||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||||
Sbjct: 573 caaaagtaagaacagtgagtttaatagcaatgaaggcgaagacaatgaccgaggcaagga 632
Query: 267 gat 269
|||
Sbjct: 633 gat 635
Score = 192 bits (97), Expect = 4e-48
Identities = 120/127 (94%), Gaps = 3/127 (2%)
Strand = Plus / Plus
Query: 314 aggatgagcataacaagttgagaagcaatgaaggtgaagatggtgaccaaggcaagaaga 373
|||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 482 aggaagagtataaccagttgagaagcaatgaaggtgaagatggtgaccaaggcaagagga 541
Query: 374 tgaag---aaaaagaagctgagtgacaagagcaaaagtaagaacagtgagtttaatagca 430
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgaagaagaaaaagaagctgagtgacaagagcaaaagtaagaacagtgagtttaatagca 601
Query: 431 atgaagg 437
|||||||
Sbjct: 602 atgaagg 608
Score = 107 bits (54), Expect = 2e-22
Identities = 98/110 (89%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 56 atgaccgaggcaaggagatgaaaaagaataagaaggagaaactaattgaagaaagcgaaa 115
||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||
Sbjct: 617 atgaccgaggcaaggagatgaaaaagaataagaagaaaaaatcaattgaagaaagcaaaa 676
Query: 116 gtaaggaagagtatgacaagttgagaagcaatgaaggtgcagatggtgac 165
|| ||| |||| || || ||||||||||||||||| ||| ||||||||||
Sbjct: 677 gtgagg-agagcataaccagttgagaagcaatgaa-gtgaagatggtgac 724
Score = 60.0 bits (30), Expect = 4e-08
Identities = 40/42 (95%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 319 gagcataacaagttgagaagcaatgaaggtgaagatggtgac 360
||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 684 gagcataaccagttgagaagcaatgaa-gtgaagatggtgac 724