Miyakogusa Predicted Gene

Lj3g3v0718210.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0718210.1 tr|C1EEL0|C1EEL0_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_103168,31.46,0.00000000000002,seg,NULL; MYB_LIKE,Myb-like
domain; HTH_MYB,Myb domain; SUBFAMILY NOT NAMED,NULL; MYB-LIKE
DNA-BINDI,CUFF.41152.1
         (1140 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO028718 weakly similar to UniRef100_A7NZN4 Cluster: Ch...   700   0.0  
gnl|LJGI|TC65528 similar to UniRef100_Q9LW95 Cluster: KED; n=1; ...   192   3e-48

>gnl|LJGI|GO028718 weakly similar to UniRef100_A7NZN4 Cluster: Chromosome chr6
            scaffold_3, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (26%)
          Length = 899

 Score =  700 bits (353), Expect = 0.0
 Identities = 423/445 (95%), Gaps = 1/445 (0%)
 Strand = Plus / Minus

                                                                        
Query: 690  ggatgaggggcgtaagtggacacctgaagagcttgattttttactcaaggcccaggatca 749
            |||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||
Sbjct: 880  ggatgaggcgcgtaagtggacacctggagagctcgattttt-actcaaggcccaggatca 822

                                                                        
Query: 750  acatggaagtgattggaaattaattgctgagggtttaaataaacatcgtcttcatgtgaa 809
            ||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||
Sbjct: 821  acatggaagtgattggaaattaattgcagaagctttaaataaacatcgtcttcatgtgaa 762

                                                                        
Query: 810  agatacatggcggagaataagacgaaccaatgcaaacaaaggacgttggtcccaagatga 869
             ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 761  ggatacatggcggagaataagacgaaccaatgcaaacacaggacgttggtcccaagatga 702

                                                                        
Query: 870  gcatcaaaggctatttgatttagtaaacaaagatctatgcgcaagagctgcagaggattg 929
            | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701  gtatcaaaggttatttgatttagtaaacaaagatctatgcgcaagagctgcagaggattg 642

                                                                        
Query: 930  tagaaaaacaaaacatggtatgttgcgagataatgttagttgggaggcaatcagtgacga 989
            ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 641  tagaaaaaataaacacggtatgttgcgagataatgttagttgggaggcaatcagtgatga 582

                                                                        
Query: 990  gtttggcactagagctattgcactgtgctgcatgaagtggtatcagcaattaacttcacc 1049
            ||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 581  gtttggctctagagctagtgcattgtgctgcatgaagtggtatcagcaattaacatcacc 522

                                                                        
Query: 1050 aatggttgctgatggtatctggagtgatagtgatgactaccgcctgctgaatgctttata 1109
            |||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||
Sbjct: 521  aatggttgctgatggtatatggagtgatactgatgactaccgcctggtgaatgctttata 462

                                     
Query: 1110 tgctttggatgcttgctccatggag 1134
            |||||||||||||||||||||||||
Sbjct: 461  tgctttggatgcttgctccatggag 437


>gnl|LJGI|TC65528 similar to UniRef100_Q9LW95 Cluster: KED; n=1; Nicotiana
           tabacum|Rep: KED - Nicotiana tabacum (Common tobacco),
           partial (6%)
          Length = 724

 Score =  192 bits (97), Expect = 3e-48
 Identities = 120/127 (94%), Gaps = 3/127 (2%)
 Strand = Plus / Plus

                                                                       
Query: 137 aggatgagcataacaagttgagaagcaatgaaggtgaagatggtgaccaaggcaagaaga 196
           |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 482 aggaagagtataaccagttgagaagcaatgaaggtgaagatggtgaccaaggcaagagga 541

                                                                       
Query: 197 tgaag---aaaaagaagctgagtgacaagagcaaaagtaagaacagtgagtttaatagca 253
           |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgaagaagaaaaagaagctgagtgacaagagcaaaagtaagaacagtgagtttaatagca 601

                  
Query: 254 atgaagg 260
           |||||||
Sbjct: 602 atgaagg 608



 Score =  139 bits (70), Expect = 4e-32
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaagaaaaagaagctgagtgacaagagcaaaagtaagaacagcgagtttaaaagcaatga 62
           |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 546 gaagaaaaagaagctgagtgacaagagcaaaagtaagaacagtgagtttaatagcaatga 605

                                         
Query: 63  aggcgaagatgatgaacgaggcaaggagat 92
           |||||||||  |||| ||||||||||||||
Sbjct: 606 aggcgaagacaatgaccgaggcaaggagat 635



 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 40/42 (95%), Gaps = 1/42 (2%)
 Strand = Plus / Plus

                                                     
Query: 142 gagcataacaagttgagaagcaatgaaggtgaagatggtgac 183
           ||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 684 gagcataaccagttgagaagcaatgaa-gtgaagatggtgac 724