Miyakogusa Predicted Gene

Lj3g3v0697060.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0697060.1 Non Chatacterized Hit- tr|I1I1W4|I1I1W4_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,68.42,0.000000000000004,Histone-fold,Histone-fold; no
description,Histone-fold; seg,NULL; CBFD_NFYB_HMF,Transcription
factor,CUFF.41141.1
         (381 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74914 similar to UniRef100_Q2HTM1 Cluster: Histone-fo...    52   3e-06

>gnl|LJGI|TC74914 similar to UniRef100_Q2HTM1 Cluster: Histone-fold/TFIID-TAF/NF-Y;
           n=1; Medicago truncatula|Rep:
           Histone-fold/TFIID-TAF/NF-Y - Medicago truncatula
           (Barrel medic), partial (55%)
          Length = 685

 Score = 52.0 bits (26), Expect = 3e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 77  tggcgaggatcaagaagattatgaag 102
           ||||||||||||||||||||||||||
Sbjct: 553 tggcgaggatcaagaagattatgaag 578