Miyakogusa Predicted Gene
- Lj3g3v0680270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0680270.1 Non Chatacterized Hit- tr|Q1PFW9|Q1PFW9_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At1,30.99,1e-17,seg,NULL; DUF761,Protein of unknown function
DUF761, plant; DUF4408,Domain of unknown function DUF44,CUFF.41178.1
(1047 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76173 similar to UniRef100_O81373 Cluster: Cotton fib... 2046 0.0
>gnl|LJGI|TC76173 similar to UniRef100_O81373 Cluster: Cotton fiber expressed protein
1; n=1; Gossypium hirsutum|Rep: Cotton fiber expressed
protein 1 - Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (22%)
Length = 1370
Score = 2046 bits (1032), Expect = 0.0
Identities = 1045/1048 (99%), Gaps = 1/1048 (0%)
Strand = Plus / Plus
Query: 1 atgggtttcctctctgtgaaaactgttctaatctccactggtattttatccatggctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atgggtttcctctctgtgaaaactgttctaatctccactggtattttatccatggctatg 98
Query: 61 gggttgaagctcacagtcccagtggtttccaatttcatcttcactgaagctgctcctaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gggttgaagctcacagtcccagtggtttccaatttcatcttcactgaagctgctcctaca 158
Query: 121 ttgtccacgtttttcctcacgtgcttcactcctccttacctctacctccttctcaacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ttgtccacgtttttcctcacgtgcttcactcctccttacctctacctccttctcaacttc 218
Query: 181 atcatcctcaccatcgttgccacctccaagctccacaaccacaacaactccccgccggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atcatcctcaccatcgttgccacctccaagctccacaaccacaacaactccccgccggac 278
Query: 241 accgcgcttcttccgacggagccgctcatccacgccgccgatgtcgccgcctacggtgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 accgcgcttcttccgacggagccgctcatccacgccgccgatgtcgccgcctacggtgtt 338
Query: 301 catatccccgctcctgagccggttaagatcttagaaaactcgcaaatcgactacaacggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 catatccccgctcctgagccggttaagatcttagaaaactcgcaaatcgactacaacggc 398
Query: 361 gaaatggagacgacgccggtgaagttctccggcggatttgaaatggaatacaacggcgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gaaatggagacgacgccggtgaagttctccggcggatttgaaatggaatacaacggcgtc 458
Query: 421 gtttctggtggatacgtgtatgaggtggaggcgaaaacgcatgcagttatcggcggcgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtttctggtggatacgtgtatgaggtggaggcgaaaacgcatgcagttatcggcggcgga 518
Query: 481 ggaggaggtaacggtttttctgttatcggcggcgaggaggagaatcttgctccgattttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaggaggtaacggtttttctgttatcggcggcgaggaggagaatcttgctccgattttg 578
Query: 541 cagaggaaggagtcgttggaattcgcgtttaacgatgagaacgagaaaccgccggtttcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cagaggaaggagtcgttggaattcgcgtttaacgatgagaacgagaaaccgccggtttcc 638
Query: 601 gccagattcggccaccggaaaacggttagatctagccccgaaggagtgacggtggttgcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gccagattcggccaccggaaaacggttagatctagccccgaaggagtgacggtggttgcg 698
Query: 661 ttgggagtgacgaaaccgaagaggcaggagacgctggagagcacgtggaggacgataacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ttgggagtgacgaaaccgaagaggcaggagacgctggagagcacgtggaggacgataacg 758
Query: 721 gaggggagagcgatgccgttgacgaggcacttgaagaaatcggagacgatggagactcag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gaggggagagcgatgccgttgacgaggcacttgaagaaatcggagacgatggagactcag 818
Query: 781 ccgcggcggaacgcggcgccgctggcggatttgaacggtccggtgatgaagaagtcggag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ccgcggcggaacgcggcgccgctggcggatttgaacggtccggtgatgaagaagtcggag 878
Query: 841 acgttcggcggcagggagaagaaggcggcggcggctacgacgtcgtcgccgggatccggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 acgttcggcggcagggagaagaaggcggcggcggctacgacgtcgtcgccgggatccggt 938
Query: 901 gggaagctgaggaaggaatcgtcgctgagtcaggacgagttgaaccggcgagttgaagcg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 gggaagctgaggaaggaatcgtcgctgagtcaggacgagttgaaccggcgagttgaagcg 998
Query: 961 ttcatcaataagttcaacgcggagatgaggttgcagaggca-ggaatcgctgaggcagta 1019
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 999 ttcatccataagttcaacgcggagatgaggttgcagaggcacggaatcgctgaggcagta 1058
Query: 1020 caaggagatggtgaatcgagtgtaactg 1047
| ||||||||||||||||||||||||||
Sbjct: 1059 ccaggagatggtgaatcgagtgtaactg 1086