Miyakogusa Predicted Gene

Lj3g3v0679240.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0679240.2 Non Chatacterized Hit- tr|D7MEG1|D7MEG1_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,52.27,3e-17,
,CUFF.41096.2
         (255 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64250 similar to UniRef100_A7P1G0 Cluster: Chromosome...   505   e-143
gnl|LJGI|GO033596 weakly similar to UniRef100_A7P1G0 Cluster: Ch...   289   4e-78

>gnl|LJGI|TC64250 similar to UniRef100_A7P1G0 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (50%)
          Length = 1606

 Score =  505 bits (255), Expect = e-143
 Identities = 255/255 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaaggcacgtgcccaaattgtggaaatgattttcaggtcttcaaatccactctgaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atgcaaggcacgtgcccaaattgtggaaatgattttcaggtcttcaaatccactctgaat 584

                                                                       
Query: 61  gatgatttgcagctttgcccttattgtggtcaacctttttctgttgttggcaatgagttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gatgatttgcagctttgcccttattgtggtcaacctttttctgttgttggcaatgagttt 644

                                                                       
Query: 121 gtaaaggactctgtgaagttttcaaaccaatctacaacgtttgggcaagcattcaataat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gtaaaggactctgtgaagttttcaaaccaatctacaacgtttgggcaagcattcaataat 704

                                                                       
Query: 181 ttctcccgctctagcaatgaaaaagattctggtagggcaattgatgttgaagctgaaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ttctcccgctctagcaatgaaaaagattctggtagggcaattgatgttgaagctgaaatt 764

                          
Query: 241 atggatgcagactga 255
           |||||||||||||||
Sbjct: 765 atggatgcagactga 779


>gnl|LJGI|GO033596 weakly similar to UniRef100_A7P1G0 Cluster: Chromosome chr19
           scaffold_4, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (15%)
          Length = 354

 Score =  289 bits (146), Expect = 4e-78
 Identities = 153/154 (99%), Gaps = 1/154 (0%)
 Strand = Plus / Plus

                                                                       
Query: 103 gttgttggcaatgagtttgtaaaggactctgtgaagttttcaaaccaatctacaacgttt 162
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gttgttggcaatgagtttgtaaaggactctgtgaagttttcaaaccaatctacaacgttt 162

                                                                       
Query: 163 gggcaagcattcaataa-tttctcccgctctagcaatgaaaaagattctggtagggcaat 221
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gggcaagcattcaataattttctcccgctctagcaatgaaaaagattctggtagggcaat 222

                                             
Query: 222 tgatgttgaagctgaaattatggatgcagactga 255
           ||||||||||||||||||||||||||||||||||
Sbjct: 223 tgatgttgaagctgaaattatggatgcagactga 256