Miyakogusa Predicted Gene

Lj3g3v0664850.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0664850.1 Non Chatacterized Hit- tr|I1LUY3|I1LUY3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52247
PE,82.64,0,WD40,WD40 repeat; GPROTEINBRPT,G-protein beta WD-40 repeat;
WD40 repeats,WD40 repeat; SUBFAMILY NOT ,CUFF.42788.1
         (2550 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU089265 weakly similar to UniRef100_A7P1I9 Cluster: Ch...   609   e-173

>gnl|LJGI|AU089265 weakly similar to UniRef100_A7P1I9 Cluster: Chromosome chr19
            scaffold_4, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 325

 Score =  609 bits (307), Expect = e-173
 Identities = 315/319 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1969 agccagatttcagcctccctcacagctaatggtaaatacatcgtcgcagcgagtgaggat 2028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7    agccagatttcagcctccctcacagctaatggtaaatacatcgtcgcagcgagtgaggat 66

                                                                        
Query: 2029 tcccatgtatacatctggaaaaatgaagctgattgcaggcctaacaggagtaaaggcgtc 2088
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67   tcccatgtatacatctggaaaaatgaagctgattgcaggcctaacaggagtaaaggcgtc 126

                                                                        
Query: 2089 actgtcacaagctcatacgaacattttcactgtaaagatgtgtcggtggccattccctgg 2148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127  actgtcacaagctcatacgaacattttcactgtaaagatgtgtcggtggccattccctgg 186

                                                                        
Query: 2149 cctggaatgggtgatgcatgggacatgcatgatacattctcagcagaacagcctgagctc 2208
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 187  cctggaatgggtgatgcatgggacatgcatgatacattctcagcanaacagcctgagctc 246

                                                                        
Query: 2209 gatagcaatgctgacgaagttgtatcaaccaatcatcctcctacccctgtagaggaaaac 2268
            |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 247  gatancaatgctgacgaanttgtatcaaccaatcatcctcctacccctgtanaggaaaac 306

                               
Query: 2269 ttcggtaccgagggttcac 2287
            |||||||||||||||||||
Sbjct: 307  ttcggtaccgagggttcac 325