Miyakogusa Predicted Gene
- Lj3g3v0663830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0663830.1 Non Chatacterized Hit- tr|I3S0C4|I3S0C4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; DUF1218,Protein of
unknown function DUF12,CUFF.42782.1
(561 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66123 similar to UniRef100_Q6T7D3 Cluster: Fiber prot... 1112 0.0
gnl|LJGI|TC73840 similar to UniRef100_Q6T7D3 Cluster: Fiber prot... 1088 0.0
gnl|LJGI|GO018285 similar to UniRef100_Q6T7D3 Cluster: Fiber pro... 1080 0.0
>gnl|LJGI|TC66123 similar to UniRef100_Q6T7D3 Cluster: Fiber protein Fb34; n=1;
Gossypium barbadense|Rep: Fiber protein Fb34 - Gossypium
barbadense (Sea-island cotton) (Egyptian cotton),
partial (98%)
Length = 1002
Score = 1112 bits (561), Expect = 0.0
Identities = 561/561 (100%)
Strand = Plus / Plus
Query: 1 atggcttccaagctggttctcatcattgtcttcgtttttgacttgatcgcttttggatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atggcttccaagctggttctcatcattgtcttcgtttttgacttgatcgcttttggatta 142
Query: 61 gcagttgctgctgaacagagaagaagcactgctaaaattgttctggacagtgaagcgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gcagttgctgctgaacagagaagaagcactgctaaaattgttctggacagtgaagcgaat 202
Query: 121 tataattactgtgtctataattctgatatcgcaactggctatggtgtgggagcatttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tataattactgtgtctataattctgatatcgcaactggctatggtgtgggagcatttctg 262
Query: 181 ttcctcatggttagtcaaatcctcataatggtggcaagtcgatgcttctgctgcgggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttcctcatggttagtcaaatcctcataatggtggcaagtcgatgcttctgctgcgggaag 322
Query: 241 cctctcaaacccggaggttctagggcctgtgcagttatccttttcataatctgctgggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctctcaaacccggaggttctagggcctgtgcagttatccttttcataatctgctgggtg 382
Query: 301 tttttcgtcatagctgaggtgtgcttgttggctggatcagtggaaaacgcctatcacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttttcgtcatagctgaggtgtgcttgttggctggatcagtggaaaacgcctatcacacc 442
Query: 361 aagtacaggaccctctttgtgaaggacaatcccccttcttgcgagacagttaggaaggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aagtacaggaccctctttgtgaaggacaatcccccttcttgcgagacagttaggaaggga 502
Query: 421 gttttcgctgctggtgctgcttttgttttcttcactgccataatttctgaattctactat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gttttcgctgctggtgctgcttttgttttcttcactgccataatttctgaattctactat 562
Query: 481 atcaactactcaagtgccagggaaagcttccaaccataccttggtggtgagaccggtgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atcaactactcaagtgccagggaaagcttccaaccataccttggtggtgagaccggtgtc 622
Query: 541 ggcatgggagcctacaaatga 561
|||||||||||||||||||||
Sbjct: 623 ggcatgggagcctacaaatga 643
>gnl|LJGI|TC73840 similar to UniRef100_Q6T7D3 Cluster: Fiber protein Fb34; n=1;
Gossypium barbadense|Rep: Fiber protein Fb34 - Gossypium
barbadense (Sea-island cotton) (Egyptian cotton),
partial (98%)
Length = 727
Score = 1088 bits (549), Expect = 0.0
Identities = 558/561 (99%)
Strand = Plus / Plus
Query: 1 atggcttccaagctggttctcatcattgtcttcgtttttgacttgatcgcttttggatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 atggcttccaagctggttctcatcattgtcttcgtttttgacttgatcgcttttggatta 177
Query: 61 gcagttgctgctgaacagagaagaagcactgctaaaattgttctggacagtgaagcgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gcagttgctgctgaacagagaagaagcactgctaaaattgttctggacagtgaagcgaat 237
Query: 121 tataattactgtgtctataattctgatatcgcaactggctatggtgtgggagcatttctg 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 238 tataattactgtgtctataattctgatatcacaactggctatggtgtgggagcatttctg 297
Query: 181 ttcctcatggttagtcaaatcctcataatggtggcaagtcgatgcttctgctgcgggaag 240
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 298 ttcctcatgattagtcaaatcctcataatggtggcaagtcgacgcttctgctgcgggaag 357
Query: 241 cctctcaaacccggaggttctagggcctgtgcagttatccttttcataatctgctgggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cctctcaaacccggaggttctagggcctgtgcagttatccttttcataatctgctgggtg 417
Query: 301 tttttcgtcatagctgaggtgtgcttgttggctggatcagtggaaaacgcctatcacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tttttcgtcatagctgaggtgtgcttgttggctggatcagtggaaaacgcctatcacacc 477
Query: 361 aagtacaggaccctctttgtgaaggacaatcccccttcttgcgagacagttaggaaggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aagtacaggaccctctttgtgaaggacaatcccccttcttgcgagacagttaggaaggga 537
Query: 421 gttttcgctgctggtgctgcttttgttttcttcactgccataatttctgaattctactat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gttttcgctgctggtgctgcttttgttttcttcactgccataatttctgaattctactat 597
Query: 481 atcaactactcaagtgccagggaaagcttccaaccataccttggtggtgagaccggtgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atcaactactcaagtgccagggaaagcttccaaccataccttggtggtgagaccggtgtc 657
Query: 541 ggcatgggagcctacaaatga 561
|||||||||||||||||||||
Sbjct: 658 ggcatgggagcctacaaatga 678
>gnl|LJGI|GO018285 similar to UniRef100_Q6T7D3 Cluster: Fiber protein Fb34; n=1;
Gossypium barbadense|Rep: Fiber protein Fb34 - Gossypium
barbadense (Sea-island cotton) (Egyptian cotton),
partial (95%)
Length = 816
Score = 1080 bits (545), Expect = 0.0
Identities = 558/561 (99%), Gaps = 1/561 (0%)
Strand = Plus / Plus
Query: 1 atggcttccaagctggttctcatcattgtcttcgtttttgacttgatcgcttttggatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atggcttccaagctggttctcatcattgtcttcgtttttgacttgatcgcttttggatta 183
Query: 61 gcagttgctgctgaacagagaagaagcactgctaaaattgttctggacagtgaagcgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gcagttgctgctgaacagagaagaagcactgctaaaattgttctggacagtgaagcgaat 243
Query: 121 tataattactgtgtctataattctgatatcgcaactggctatggtgtgggagcatttctg 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tataactactgtgtctataattctgatatcgcaactggctatggtgtgggagcatttctg 303
Query: 181 ttcctcatggttagtcaaatcctcataatggtggcaagtcgatgcttctgctgcgggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttcctcatggttagtcaaatcctcataatggtggcaagtcgatgcttctgctgcgggaag 363
Query: 241 cctctcaaacccggaggttctagggcctgtgcagttatccttttcataatctgctgggtg 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 364 cctctcaaacccggaggttctagggcctgtacagttatccttttcataatctgctgggtg 423
Query: 301 tttttcgtcatagctgaggtgtgcttgttggctggatcagtggaaaacgcctatcacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tttttcgtcatagctgaggtgtgcttgttggctggatcagtggaaaacgcctatcacacc 483
Query: 361 aagtacaggaccctctttgtgaaggacaatcccccttcttgcgagacagttaggaaggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aagtacaggaccctctttgtgaaggacaatcccccttcttgcgagacagttaggaaggga 543
Query: 421 gttttcgctgctggtgctgcttttgttttcttcactgccataatttctgaattctactat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gttttcgctgctggtgctgcttttgttttcttcactgccataatttctgaattctactat 603
Query: 481 atcaactactcaagtgccagggaaagcttccaaccataccttggtggtgagaccggtgtc 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 604 atcaactactcaagtgccagggaaagcttccaa-cataccttggtggtgagaccggtgtc 662
Query: 541 ggcatgggagcctacaaatga 561
|||||||||||||||||||||
Sbjct: 663 ggcatgggagcctacaaatga 683