Miyakogusa Predicted Gene

Lj3g3v0642580.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0642580.1 tr|Q6UP31|Q6UP31_CHLRE NADH:ubiquinone
oxidoreductase 18 kDa subunit OS=Chlamydomonas reinhardtii
GN,35.06,1e-17,NDUFA12,NADH:ubiquinone oxidoreductase, 17.2kDa
subunit; SUBFAMILY NOT NAMED,NULL; NADH-UBIQUINONE O,CUFF.41082.1
         (480 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66653 similar to UniRef100_A7PBC9 Cluster: Chromosome...   936   0.0  

>gnl|LJGI|TC66653 similar to UniRef100_A7PBC9 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (96%)
          Length = 832

 Score =  936 bits (472), Expect = 0.0
 Identities = 478/480 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcatcgctggtgaagagcattctcaattcagtgaaagagaagggtttgggcggtttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  atggcatcgctggtgaagagcattctcaattcagtgaaagagaagggtttgggcggtttc 153

                                                                       
Query: 61  ctcagacacctcaaggacgatggcttcatgagatgccttccagatggaaacctcttgcaa 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 154 ctcagacacctcaaggacgatggcttcatgagatgctttccagatggaaacctcttgcaa 213

                                                                       
Query: 121 accaagatccacggtattggggcaaggcttgttggtgttgacaaatttggcaacaagtat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 accaagatccacggtattggggcaaggcttgttggtgttgacaaatttggcaacaagtat 273

                                                                       
Query: 181 tacgagaaaattgaaaacacaataaatggaaggcacaggtgggttgaatatgcggagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tacgagaaaattgaaaacacaataaatggaaggcacaggtgggttgaatatgcggagaag 333

                                                                       
Query: 241 aagagatataatgcttctcaggttccacctgaatggcatggctggctccacttcataact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagagatataatgcttctcaggttccacctgaatggcatggctggctccacttcataact 393

                                                                       
Query: 301 gatcacacaggagatgagcttcttttactgaaaccgaaaaggtacggtgttgaacacaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gatcacacaggagatgagcttcttttactgaaaccgaaaaggtacggtgttgaacacaaa 453

                                                                       
Query: 361 gaaaatttgtctggagaaggagaacagtttatctatcattccaagggacatgcccttaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 454 gaaaatttgtctggagaaggagaacagtttatctatcattccaagggtcatgcccttaat 513

                                                                       
Query: 421 ccagggcagagaaactggaccaggtaccaaccatgggagtccaaggcccctgaacaatga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ccagggcagagaaactggaccaggtaccaaccatgggagtccaaggcccctgaacaatga 573