Miyakogusa Predicted Gene

Lj3g3v0642540.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0642540.1 Non Chatacterized Hit- tr|A9NPM0|A9NPM0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,32.89,1e-17,seg,NULL; EF_HAND_2,EF-HAND 2; no
description,EF-hand-like domain,CUFF.41062.1
         (507 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO006071 weakly similar to UniRef100_A9SSD2 Cluster: Pr...  1005   0.0  

>gnl|LJGI|GO006071 weakly similar to UniRef100_A9SSD2 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (33%)
          Length = 670

 Score = 1005 bits (507), Expect = 0.0
 Identities = 507/507 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggacaagtctttgacaaactacaaggtaaggattggagggaaaagcaaataaggaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27  atgggacaagtctttgacaaactacaaggtaaggattggagggaaaagcaaataaggaag 86

                                                                       
Query: 61  ataaccgatcgagtttttgaacgagtaaagagtcaaatgcaaactaataatttgtgtttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  ataaccgatcgagtttttgaacgagtaaagagtcaaatgcaaactaataatttgtgtttt 146

                                                                       
Query: 121 gaagaactgtatattgctgtattacttgtgtacaatgatatcaataagtatattcctggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gaagaactgtatattgctgtattacttgtgtacaatgatatcaataagtatattcctggt 206

                                                                       
Query: 181 ccccattttgatcctccatcaaaagaaaaagtcagagaagtcatgaagaactgcgatatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccccattttgatcctccatcaaaagaaaaagtcagagaagtcatgaagaactgcgatatc 266

                                                                       
Query: 241 aacttcgatggagaaattgatcccgaagaattttacagtttcatccagataatgacagct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aacttcgatggagaaattgatcccgaagaattttacagtttcatccagataatgacagct 326

                                                                       
Query: 301 gacacagtcacttttgttggtcaaaagcttatcatcactttggttgtagcaccggcggtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gacacagtcacttttgttggtcaaaagcttatcatcactttggttgtagcaccggcggtg 386

                                                                       
Query: 361 gcggtggcaacgaagaaagccactgaaggtgtcccaggtgttgggaaactggtgcaaagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gcggtggcaacgaagaaagccactgaaggtgtcccaggtgttgggaaactggtgcaaagg 446

                                                                       
Query: 421 ttacccaactcagtttatgcttctcttgtgacacttgcagctgtgtggttccagaacgcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttacccaactcagtttatgcttctcttgtgacacttgcagctgtgtggttccagaacgcg 506

                                      
Query: 481 gcacaggattctcagaacttctagtca 507
           |||||||||||||||||||||||||||
Sbjct: 507 gcacaggattctcagaacttctagtca 533