Miyakogusa Predicted Gene

Lj3g3v0642480.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0642480.1 Non Chatacterized Hit- tr|K3ZY46|K3ZY46_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si031528,65.91,5e-19,Ribosomal_L18p,Ribosomal protein L18/L5; no
description,NULL; Translational machinery components,NUL,CUFF.41060.1
         (265 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO032019 similar to UniRef100_A7PQS9 Cluster: Chromosom...   525   e-149

>gnl|LJGI|GO032019 similar to UniRef100_A7PQS9 Cluster: Chromosome chr6 scaffold_25,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_25, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 614

 Score =  525 bits (265), Expect = e-149
 Identities = 265/265 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacgcttatgaagcgatatgtgctgagattgttcacatcattgaagtacattactgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atgacgcttatgaagcgatatgtgctgagattgttcacatcattgaagtacattactgcc 396

                                                                       
Query: 61  aacgtggtagacagaaacaacggacgaattgtagcgacatcgtccacagtagaacacgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aacgtggtagacagaaacaacggacgaattgtagcgacatcgtccacagtagaacacgcc 456

                                                                       
Query: 121 atgaaagagtcactcgagtgtggccggtcctgcaatgcaaaagcagctgctattgttggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atgaaagagtcactcgagtgtggccggtcctgcaatgcaaaagcagctgctattgttggg 516

                                                                       
Query: 181 gaggtattggccaggaggctgaaagttgaggggctcaatgaaggagaaggaagaggtatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaggtattggccaggaggctgaaagttgaggggctcaatgaaggagaaggaagaggtatt 576

                                    
Query: 241 catgtgaatgtaaagaaagaagtgg 265
           |||||||||||||||||||||||||
Sbjct: 577 catgtgaatgtaaagaaagaagtgg 601