Miyakogusa Predicted Gene
- Lj3g3v0599570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0599570.1 Non Chatacterized Hit- tr|B9RUR2|B9RUR2_RICCO 60S
ribosomal protein L37a, putative OS=Ricinus
commun,85.29,3.00004e-41,no description,Ribosomal protein L37ae/L37e,
N-terminal; Ribosomal_L37ae,Ribosomal protein L37ae; Zn,CUFF.41025.1
(396 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68678 homologue to UniRef100_Q9ZRS8 Cluster: 60S ribo... 607 e-173
gnl|LJGI|TC70043 homologue to UniRef100_Q9ZRS8 Cluster: 60S ribo... 236 8e-62
gnl|LJGI|TC71992 homologue to UniRef100_Q9ZRS8 Cluster: 60S ribo... 194 3e-49
gnl|LJGI|TC64659 homologue to UniRef100_Q9ZRS8 Cluster: 60S ribo... 188 2e-47
gnl|LJGI|TC62522 similar to UniRef100_O80363 Cluster: 50S riboso... 72 3e-12
>gnl|LJGI|TC68678 homologue to UniRef100_Q9ZRS8 Cluster: 60S ribosomal protein L37a;
n=2; Pinaceae|Rep: 60S ribosomal protein L37a -
Pseudotsuga menziesii (Douglas-fir), complete
Length = 623
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 91 ctcgaaacgcttagcagccgcgcctccaatcttccatcttcgcctgccaaaatgaccaag 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ctcgaaacgcttagcagccgcgcctccaatcttccatcttcgcctgccaaaatgaccaag 62
Query: 151 agaaccaagaaggccggtattgttgggaaatacggcacccgatatggtgctagtttgagg 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agaaccaagaaggccggtattgttgggaaatacggcacccgatatggtgctagtttgagg 122
Query: 211 aagcaaattaagaagatggaggtcagtcagcacagcaagttcttctgtgagttctgtgga 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aagcaaattaagaagatggaggtcagtcagcacagcaagttcttctgtgagttctgtgga 182
Query: 271 aagtatgctgttaagagaaaggctgtgggcatttggggctgcaaagattgtggaaaggtc 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aagtatgctgttaagagaaaggctgtgggcatttggggctgcaaagattgtggaaaggtc 242
Query: 331 aaggctgggggtgcttatacattgaatactgccagtgctgtgactgtccggagtactatc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaggctgggggtgcttatacattgaatactgccagtgctgtgactgtccggagtactatc 302
Query: 391 aggagg 396
||||||
Sbjct: 303 aggagg 308
>gnl|LJGI|TC70043 homologue to UniRef100_Q9ZRS8 Cluster: 60S ribosomal protein L37a;
n=2; Pinaceae|Rep: 60S ribosomal protein L37a -
Pseudotsuga menziesii (Douglas-fir), complete
Length = 546
Score = 236 bits (119), Expect = 8e-62
Identities = 221/255 (86%)
Strand = Plus / Plus
Query: 142 atgaccaagagaaccaagaaggccggtattgttgggaaatacggcacccgatatggtgct 201
||||| ||||||||||||||||| || |||||||| ||||| || |||||||||||||||
Sbjct: 75 atgactaagagaaccaagaaggctggcattgttggaaaatatggtacccgatatggtgct 134
Query: 202 agtttgaggaagcaaattaagaagatggaggtcagtcagcacagcaagttcttctgtgag 261
||| || ||||||| |||||||||||||| || |||||||| |||||||| |||||||||
Sbjct: 135 agtctgcggaagcagattaagaagatggaagttagtcagcatagcaagtttttctgtgag 194
Query: 262 ttctgtggaaagtatgctgttaagagaaaggctgtgggcatttggggctgcaaagattgt 321
|| ||||||||||||||||| ||||| || |||||||| || ||||| ||||| ||||||
Sbjct: 195 ttttgtggaaagtatgctgtgaagaggaaagctgtgggaatatgggggtgcaaggattgt 254
Query: 322 ggaaaggtcaaggctgggggtgcttatacattgaatactgccagtgctgtgactgtccgg 381
|| || || || ||||| ||||| || || ||||||||||| |||||||||||||| |||
Sbjct: 255 gggaaagtgaaagctggcggtgcctacactttgaatactgctagtgctgtgactgtgcgg 314
Query: 382 agtactatcaggagg 396
|| || ||| |||||
Sbjct: 315 agcaccatccggagg 329
>gnl|LJGI|TC71992 homologue to UniRef100_Q9ZRS8 Cluster: 60S ribosomal protein L37a;
n=2; Pinaceae|Rep: 60S ribosomal protein L37a -
Pseudotsuga menziesii (Douglas-fir), partial (85%)
Length = 518
Score = 194 bits (98), Expect = 3e-49
Identities = 182/210 (86%)
Strand = Plus / Plus
Query: 187 acccgatatggtgctagtttgaggaagcaaattaagaagatggaggtcagtcagcacagc 246
|||||||||||||||||| || ||||||| |||||||||||||| || |||||||| |||
Sbjct: 150 acccgatatggtgctagtctgcggaagcagattaagaagatggaagttagtcagcatagc 209
Query: 247 aagttcttctgtgagttctgtggaaagtatgctgttaagagaaaggctgtgggcatttgg 306
||||| ||||||||||| ||||||||||||||||| ||||| || |||||||| || |||
Sbjct: 210 aagtttttctgtgagttttgtggaaagtatgctgtgaagaggaaagctgtgggaatatgg 269
Query: 307 ggctgcaaagattgtggaaaggtcaaggctgggggtgcttatacattgaatactgccagt 366
|| ||||| |||||||| || || || ||||| ||||| || || ||||||||||| |||
Sbjct: 270 gggtgcaaggattgtgggaaagtgaaagctggcggtgcctacactttgaatactgctagt 329
Query: 367 gctgtgactgtccggagtactatcaggagg 396
||||||||||| ||||| || ||| |||||
Sbjct: 330 gctgtgactgtgcggagcaccatccggagg 359
>gnl|LJGI|TC64659 homologue to UniRef100_Q9ZRS8 Cluster: 60S ribosomal protein L37a;
n=2; Pinaceae|Rep: 60S ribosomal protein L37a -
Pseudotsuga menziesii (Douglas-fir), complete
Length = 654
Score = 188 bits (95), Expect = 2e-47
Identities = 215/255 (84%)
Strand = Plus / Plus
Query: 142 atgaccaagagaaccaagaaggccggtattgttgggaaatacggcacccgatatggtgct 201
||||| |||||||| |||||||| || || ||||| |||||||| ||||| |||||||||
Sbjct: 73 atgactaagagaacaaagaaggctggcatcgttggaaaatacggtacccgttatggtgct 132
Query: 202 agtttgaggaagcaaattaagaagatggaggtcagtcagcacagcaagttcttctgtgag 261
||| || ||||||| |||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 133 agtctgcggaagcagattaagaagatggaagttagtcaacacagcaagtttttctgtgaa 192
Query: 262 ttctgtggaaagtatgctgttaagagaaaggctgtgggcatttggggctgcaaagattgt 321
|| ||||||||||||||||| ||||| || || ||||| || ||||| ||||| || |||
Sbjct: 193 ttttgtggaaagtatgctgtgaagaggaaagcagtgggaatatggggatgcaaggactgt 252
Query: 322 ggaaaggtcaaggctgggggtgcttatacattgaatactgccagtgctgtgactgtccgg 381
|| || || || || || ||||| || || |||||||| || |||||||||||||| |||
Sbjct: 253 ggcaaagtgaaagcaggcggtgcctacactttgaataccgcaagtgctgtgactgtacgg 312
Query: 382 agtactatcaggagg 396
|| || |||||||||
Sbjct: 313 agcaccatcaggagg 327
>gnl|LJGI|TC62522 similar to UniRef100_O80363 Cluster: 50S ribosomal protein L17,
chloroplast precursor; n=1; Nicotiana tabacum|Rep: 50S
ribosomal protein L17, chloroplast precursor - Nicotiana
tabacum (Common tobacco), partial (38%)
Length = 712
Score = 71.9 bits (36), Expect = 3e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 361 gccagtgctgtgactgtccggagtactatcaggagg 396
||||||||||||||||||||||||||||||||||||
Sbjct: 475 gccagtgctgtgactgtccggagtactatcaggagg 510