Miyakogusa Predicted Gene

Lj3g3v0593220.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0593220.1 Non Chatacterized Hit- tr|D8RQG8|D8RQG8_SELML
Putative uncharacterized protein OS=Selaginella moelle,42.61,7e-16,no
description,NULL; SUBFAMILY NOT NAMED,NULL; PAX6 NEIGHBOR PROTEIN
(PAXNEB),NULL; seg,NULL; PAXNEB,CUFF.40998.1
         (504 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61969 similar to UniRef100_A7R0V7 Cluster: Chromosome...   936   0.0  

>gnl|LJGI|TC61969 similar to UniRef100_A7R0V7 Cluster: Chromosome undetermined
           scaffold_324, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_324,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (50%)
          Length = 831

 Score =  936 bits (472), Expect = 0.0
 Identities = 495/504 (98%), Gaps = 2/504 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgcaaccaggagtcgagttagtagcttttctcggaatgtgtcaactgcaacatct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atggctgcaaccaggagtcgagttagtagcttttctcggaatgtgtcaactgcaacatct 254

                                                                       
Query: 61  cagaatccggggctcaagcatggccctaacgggaccacgttcatctcatccgggattccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cagaatccggggctcaagcatggccctaacgggaccacgttcatctcatccgggattccg 314

                                                                       
Query: 121 gatcttgacaagattttaggtggtggtttttccctcggtagccttgtcatgattatggaa 180
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gatcttgacaa--ttttaggtggtggtttttccctcggtagccttgtcatgattatggaa 372

                                                                       
Query: 181 gatgctgaggcaccgcatcatatgcttctattgagaaattttatgtctcaaggacttgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gatgctgaggcaccgcatcatatgcttctattgagaaattttatgtctcaaggacttgta 432

                                                                       
Query: 241 cacagacagccactcttgtatgctagtgcatctagagaccctaaaggatttctcggcact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cacagacagccactcttgtatgctagtgcatctagagaccctaaaggatttctcggcact 492

                                                                       
Query: 301 ttgcctagtccagggtcatccaaagaggataaatctcgggatcttggccatgaaaaggat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttgcctagtccagggtcatccaaagaggataaatctcgggatcttggccatgaaaaggat 552

                                                                       
Query: 361 ctgagaattgcttggcagtacaagaagtactttggtgagcctcagctaaatgtcaactct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ctgagaattgcttggcagtacaagaagtactttggtgagcctcagctaaatgtcaactct 612

                                                                       
Query: 421 aataatggtggtcagcacgattactgcaatgattttgacttgcgaaagcccttggatagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aataatggtggtcagcacgattactgcaatgattttgacttgcgaaagcccttggatagg 672

                                   
Query: 481 cannnnnnnggtggcatgaatgta 504
           ||       |||||||||||||||
Sbjct: 673 catttttttggtggcatgaatgta 696