Miyakogusa Predicted Gene

Lj3g3v0592190.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0592190.1 Non Chatacterized Hit- tr|J3L5E5|J3L5E5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G4,61.4,0.0000000000005,FAMILY NOT NAMED,NULL; WRKY,DNA-binding
WRKY; no description,DNA-binding WRKY; DNA binding
domain,DN,CUFF.40993.1
         (675 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP046076 homologue to UniRef100_A7PK83 Cluster: Chromos...   680   0.0  
gnl|LJGI|TC69589 homologue to UniRef100_A7LHH7 Cluster: WRKY39; ...    66   3e-10
gnl|LJGI|TC63081 homologue to UniRef100_A7PJV5 Cluster: Chromoso...    54   1e-06
gnl|LJGI|AV423612 similar to UniRef100_A7QN97 Cluster: Chromosom...    52   5e-06
gnl|LJGI|TC65806 similar to UniRef100_A7LHG5 Cluster: WRKY20; n=...    52   5e-06

>gnl|LJGI|BP046076 homologue to UniRef100_A7PK83 Cluster: Chromosome chr15
           scaffold_19, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_19, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (52%)
          Length = 593

 Score =  680 bits (343), Expect = 0.0
 Identities = 357/364 (98%)
 Strand = Plus / Minus

                                                                       
Query: 312 ttgcactggaaatactagtgatgggaacaacacatggtggaggagtggagggtcagagaa 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttgcactggaaatactagtgatgggaacaacacatggtggaggagtggagggtcagagaa 534

                                                                       
Query: 372 gagcaaggtgaaagtgaggaggaagctgagagagccaaggttttgtttccaaacaagaag 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gagcaaggtgaaagtgaggaggaagctgagagagccaaggttttgtttccaaacaagaag 474

                                                                       
Query: 432 tgatgtggatgtgcttgatgatggttacaaatggaggaaatatggtcagaaagttgtcaa 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tgatgtggatgtgcttgatgatggttacaaatggaggaaatatggtcagaaagttgtcaa 414

                                                                       
Query: 492 gaatagccttcatccaagaagttattaccgttgcacccatagcaattgcagggtgnnnnn 551
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 413 gaatagccttcatccaagaagttattaccgttgcacccatagcaattgcagggtgaaaaa 354

                                                                       
Query: 552 nngagttgaacgtctctcagaagattgtcgtatggtgataacaacgtatgaaggtagaca 611
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aagagttgaacgtctctcagaagattgtcgtatggtgataacaacgtatgaaggtagaca 294

                                                                       
Query: 612 caatcactctccttgcgacgaatcaaattcatctgaacatgaatgttttacctctttttg 671
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 caatcactctccttgcgacgaatcaaattcatctgaacatgaatgttttacctctttttg 234

               
Query: 672 aaca 675
           ||||
Sbjct: 233 aaca 230


>gnl|LJGI|TC69589 homologue to UniRef100_A7LHH7 Cluster: WRKY39; n=1; Glycine
           max|Rep: WRKY39 - Glycine max (Soybean), partial (62%)
          Length = 1146

 Score = 65.9 bits (33), Expect = 3e-10
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 448 gatgatggttacaaatggaggaaatatggtcagaaagttgt 488
           ||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 275 gatgatggttacagatggaggaaatatgggcagaaagttgt 315


>gnl|LJGI|TC63081 homologue to UniRef100_A7PJV5 Cluster: Chromosome chr12
           scaffold_18, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (62%)
          Length = 1376

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                       
Query: 445 cttgatgatggttacaaatggaggaaatatggtcagaaagttgtcaagaatagccttcat 504
           ||||| ||||| |||| |||||| |||||||| |||||||  ||||||||||| | | | 
Sbjct: 533 cttgaagatggatacagatggagaaaatatggacagaaagcagtcaagaatagtccttac 592

                          
Query: 505 ccaagaagttattac 519
           ||||| |||||||||
Sbjct: 593 ccaaggagttattac 607


>gnl|LJGI|AV423612 similar to UniRef100_A7QN97 Cluster: Chromosome chr2 scaffold_132,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_132, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 304

 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 447 tgatgatggttacaaatggaggaaatatggtcagaaag 484
           ||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 172 tgatgatggttacaactggagaaaatatggtcaaaaag 209


>gnl|LJGI|TC65806 similar to UniRef100_A7LHG5 Cluster: WRKY20; n=1; Glycine max|Rep:
           WRKY20 - Glycine max (Soybean), partial (52%)
          Length = 766

 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 447 tgatgatggttacaaatggaggaaatatggtcagaaag 484
           ||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 601 tgatgatggttacaactggagaaaatatggtcaaaaag 638