Miyakogusa Predicted Gene
- Lj3g3v0566080.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0566080.2 Non Chatacterized Hit- tr|H3GRN7|H3GRN7_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,26.88,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
CRT-like,Chloroquine resistance transporter-related,CUFF.40988.2
(1290 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77891 similar to UniRef100_A1L4X0 Cluster: At4g24460;... 1059 0.0
gnl|LJGI|TC70474 weakly similar to UniRef100_A7NUK0 Cluster: Chr... 733 0.0
>gnl|LJGI|TC77891 similar to UniRef100_A1L4X0 Cluster: At4g24460; n=1; Arabidopsis
thaliana|Rep: At4g24460 - Arabidopsis thaliana
(Mouse-ear cress), partial (24%)
Length = 648
Score = 1059 bits (534), Expect = 0.0
Identities = 541/542 (99%), Gaps = 1/542 (0%)
Strand = Plus / Plus
Query: 1 atggcactttgttctccaacatcatcaccatcactccattctctcccgtcgcgtttccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atggcactttgttctccaacatcatcaccatcactccattctctcccgtcgcgtttccca 98
Query: 61 tccccacggcgactccacggaggaacgacgctgtttccgccgcaacaacctcttctccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 tccccacggcgactccacggaggaacgacgctgtttccgccgcaacaacctcttctccca 158
Query: 121 atggcgtcgtggtcgttatcttcttccaaaacaccgtctcagttaccttcttccactgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atggcgtcgtggtcgttatcttcttccaaaacaccgtctcagttaccttcttccactgtc 218
Query: 181 aaactcaaccgtagccacaaccaccaccgaaacttcttcaaattccgcgcttccgcaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aaactcaaccgtagccacaaccaccaccgaaacttcttcaaattccgcgcttccgcaacc 278
Query: 241 tcttcatcgggcagtggtagcggcggtgccagcgtcgttttgttgacctccaccgtcacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tcttcatcgggcagtggtagcggcggtgccagcgtcgttttgttgacctccaccgtcacg 338
Query: 301 gtaacattagctgtagctaatcgagttctctacaaactcgctcttgttcccatgagtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtaacattagctgtagctaatcgagttctctacaaactcgctcttgttcccatgagtgat 398
Query: 361 tacccctttttcctcgctcagctcacaacttttggct-atgttgctgtgtattttagcat 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 399 tacccctttttcctcgctcagctcacaacttttggctcatgttgctgtgtattttagcat 458
Query: 420 cttgtatatccgataccggttagggattgttaccaatgagatgctggcgattccgaaatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cttgtatatccgataccggttagggattgttaccaatgagatgctggcgattccgaaatg 518
Query: 480 gcggtttttgattatcgggtttttagaagctttgggagtggcttctggaatgtctgctgc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gcggtttttgattatcgggtttttagaagctttgggagtggcttctggaatgtctgctgc 578
Query: 540 ag 541
||
Sbjct: 579 ag 580
Score = 133 bits (67), Expect = 3e-30
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 577 cagacttatttagtttggcagctgatgttttctactcttctcttgaggaggaggtactca 636
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 578 cagacttatttagtttggcagctgatgttttctactcttctcttgaggagaaggtactca 637
Query: 637 atcaaccaaat 647
|||||||||||
Sbjct: 638 atcaaccaaat 648
>gnl|LJGI|TC70474 weakly similar to UniRef100_A7NUK0 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (27%)
Length = 560
Score = 733 bits (370), Expect = 0.0
Identities = 373/374 (99%)
Strand = Plus / Plus
Query: 917 ctaacttgaaaggcataccatttgttcaacttccttcatatcttaaaagtggtgcgggtt 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaacttgaaaggcataccatttgttcaacttccttcatatcttaaaagtggtgcgggtt 60
Query: 977 gctttctaaacattggagctgatacatcaagttgtgctggtgctcccttacttccgctac 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctttctaaacattggagctgatacatcaagttgtgctggtgctcccttacttccgctac 120
Query: 1037 tttacatagttaccaatttggcattcaacatatccctgcttcaagttttgaaatcttctt 1096
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttacatagttacccatttggcattcaacatatccctgcttcaagttttgaaatcttctt 180
Query: 1097 cagcagttgtagcttctctcgtgttaatgctctcagtgcctgtttctgtttatattcttt 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagcagttgtagcttctctcgtgttaatgctctcagtgcctgtttctgtttatattcttt 240
Query: 1157 ccctcccattaccatatcttcctgaggcaacaagcctgagcccatttttcctgcttggat 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccctcccattaccatatcttcctgaggcaacaagcctgagcccatttttcctgcttggat 300
Query: 1217 gtggagttcttgtatgtggtctttatctgtacaacacaactcgacctgcgagaaatagtt 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggagttcttgtatgtggtctttatctgtacaacacaactcgacctgcgagaaatagtt 360
Query: 1277 ctgaaattgactga 1290
||||||||||||||
Sbjct: 361 ctgaaattgactga 374