Miyakogusa Predicted Gene
- Lj3g3v0549580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0549580.1 Non Chatacterized Hit- tr|I3TA34|I3TA34_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,79.17,0.005,seg,NULL,CUFF.40975.1
(238 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS329350 weakly similar to UniRef100_A7P402 Cluster: Ch... 430 e-120
gnl|LJGI|BP049772 weakly similar to UniRef100_A7P402 Cluster: Ch... 422 e-118
gnl|LJGI|BW612099 similar to UniRef100_A7P402 Cluster: Chromosom... 373 e-103
gnl|LJGI|BW596026 268 1e-71
gnl|LJGI|DC593222 homologue to UniRef100_A8CG43 Cluster: NADH-ub... 266 5e-71
gnl|LJGI|TC60856 weakly similar to UniRef100_A7P629 Cluster: Chr... 224 2e-58
gnl|LJGI|DC599657 homologue to UniRef100_A6YIK1 Cluster: NADH-ub... 165 1e-40
gnl|LJGI|TC68847 UniRef100_A9TQA4 Cluster: Predicted protein; n=... 165 1e-40
gnl|LJGI|TC69937 similar to UniRef100_Q3HY29 Cluster: Cyclooxyge... 80 7e-15
>gnl|LJGI|FS329350 weakly similar to UniRef100_A7P402 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 651
Score = 430 bits (217), Expect = e-120
Identities = 231/238 (97%)
Strand = Plus / Minus
Query: 1 atggaggagaagaagatttttatcacctgctgtgcgaatctcgcagtcgattcctcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 atggaggagaagaagatttttatcacctgctgtgcgaatctcgcagtcgattcctcagtt 288
Query: 61 cctaatggacgggaccgattcctcagttcgccatccacctatctcccctacctcgcacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cctaatggacgggaccgattcctcagttcgccatccacctatctcccctacctcgcacgt 228
Query: 121 cgccggagccctcagggtcttcacctcgtcgccgatgccgatgccgatgccgatgccgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 cgccggagccctcagggtcttcacctcgtcgccgatgccgatgccgatgccgatgccgct 168
Query: 181 gcggnnnnnnncgtcagccacaactttgggggtttaagagagggccttgcgatgtaat 238
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gcggaaaaaaacgtcagccacaactttgggggtttaagagagggccttgcgatgtaat 110
>gnl|LJGI|BP049772 weakly similar to UniRef100_A7P402 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 530
Score = 422 bits (213), Expect = e-118
Identities = 230/238 (96%)
Strand = Plus / Minus
Query: 1 atggaggagaagaagatttttatcacctgctgtgcgaatctcgcagtcgattcctcagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atggaggagaagaagatttttatcacctgctgtgcgaatctcgcagtcgattcctcagtt 292
Query: 61 cctaatggacgggaccgattcctcagttcgccatccacctatctcccctacctcgcacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cctaatggacgggaccgattcctcagttcgccatccacctatctcccctacctcgcacgt 232
Query: 121 cgccggagccctcagggtcttcacctcgtcgccgatgccgatgccgatgccgatgccgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 cgccggagccctcagggtcttcacctcgtcgccgatgccgatgccgatgccgatgccgct 172
Query: 181 gcggnnnnnnncgtcagccacaactttgggggtttaagagagggccttgcgatgtaat 238
|||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 171 gcggaaaaaaacgtcagccacaactttggtggtttaagagagggccttgcgatgtaat 114
>gnl|LJGI|BW612099 similar to UniRef100_A7P402 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 473
Score = 373 bits (188), Expect = e-103
Identities = 205/213 (96%)
Strand = Plus / Minus
Query: 26 cctgctgtgcgaatctcgcagtcgattcctcagttcctaatggacgggaccgattcctca 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cctgctgtgcgaatctcgcagtcgattcctcagttcctaatggacgggaccgattcctca 237
Query: 86 gttcgccatccacctatctcccctacctcgcacgtcgccggagccctcagggtcttcacc 145
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 236 gttcgccatccacctatctcccctacttcgcacgtcgccggagccctcagggtcttcacc 177
Query: 146 tcgtcgccgatgccgatgccgatgccgatgccgctgcggnnnnnnncgtcagccacaact 205
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 176 tcgtcgccgatgccgatgccgatgccgatgccgctgcggaaaaaaacgtcagccacaact 117
Query: 206 ttgggggtttaagagagggccttgcgatgtaat 238
|||||||||||||||||||||||||||||||||
Sbjct: 116 ttgggggtttaagagagggccttgcgatgtaat 84
>gnl|LJGI|BW596026
Length = 457
Score = 268 bits (135), Expect = 1e-71
Identities = 194/213 (91%), Gaps = 2/213 (0%)
Strand = Plus / Minus
Query: 26 cctgctgtgcgaatctcgcagtcgattcctcagttcctaatggacgggaccgattcctca 85
|||| |||||||||||||||||||||||||||||| |||||||||| || |||| |||
Sbjct: 304 cctgttgtgcgaatctcgcagtcgattcctcagttattaatggacggaacaaattcttca 245
Query: 86 gttcgccatccacctatctcccctacctcgcacgtcgccggagccctcagggtcttcacc 145
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 244 gttcgccatccacctatctcccctacctcgcacgccgccggagccctcagggtcttcacc 185
Query: 146 tcgtcgccgatgccgatgccgatgccgatgccgctgcggnnnnnnncgtcagccacaact 205
||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 184 tcgtcgccgatgccgatgccgatgccgatgccgctgcgg-gaaaaacgacagccacaact 126
Query: 206 ttgggggtttaagagagggccttgcgatgtaat 238
|| |||||| |||||||||||||||||| ||||
Sbjct: 125 tt-ggggttaaagagagggccttgcgatttaat 94
>gnl|LJGI|DC593222 homologue to UniRef100_A8CG43 Cluster: NADH-ubiquinone
oxidoreductase chain 4; n=1; Culicoides arakawae|Rep:
NADH-ubiquinone oxidoreductase chain 4 - Culicoides
arakawae, partial (4%)
Length = 588
Score = 266 bits (134), Expect = 5e-71
Identities = 210/240 (87%), Gaps = 17/240 (7%)
Strand = Plus / Minus
Query: 4 gaggagaagaagatttttatcacctgctgtgcgaatctcgcagtcgattcctcagttcct 63
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 324 gaggagaagaagatttttatgacctgctgtgcgaatctcgcagtcgattccgcagttcct 265
Query: 64 aatggacgggaccgattcctcagttcgccatccacctatctcccctacctcgcacgtcgc 123
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 264 aatggacgggacagattcctcagttcgccatccacctatctcccctacctcgcacgccgc 205
Query: 124 cggag-----ccctcagggtcttcacctcgtcgccgatgccgatgccgatgccgatgccg 178
||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 204 cggagcccgcccctcagggtcttcacctcgtc------------gccgatgccgatgccg 157
Query: 179 ctgcggnnnnnnncgtcagccacaactttgggggtttaagagagggccttgcgatgtaat 238
|||||| || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 156 ctgcggaaaaaaacgacagccacaactttgggggttaaagagagggccttgcgatgtaat 97
>gnl|LJGI|TC60856 weakly similar to UniRef100_A7P629 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 1537
Score = 224 bits (113), Expect = 2e-58
Identities = 180/207 (86%), Gaps = 12/207 (5%)
Strand = Plus / Minus
Query: 31 tgtgcgaatctcgcagtcgattcctcagttcctaatggacgggaccgattcctcagttcg 90
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 273 tgtgcaaatctcgcagtcgattcctcagttcctaatggacgggacagattcctcagttcg 214
Query: 91 ccatccacctatctcccctacctcgcacgtcgccggagccctcagggtcttcacctcgtc 150
|||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 213 ccatccgcctatctcccctacctcgcacgccgccggagccctcagggtctccacctcgtc 154
Query: 151 gccgatgccgatgccgatgccgatgccgctgcggnnnnnnncgtcagccacaactttggg 210
||| |||| |||||||||||||| || ||||||||||||||||
Sbjct: 153 gcc------------gatgtcgatgccgctgcggaaaaaaacgacagccacaactttggg 106
Query: 211 ggtttaagagagggccttgcgatgtaa 237
|||||| ||||||||||||||||||||
Sbjct: 105 ggtttaggagagggccttgcgatgtaa 79
>gnl|LJGI|DC599657 homologue to UniRef100_A6YIK1 Cluster: NADH-ubiquinone
oxidoreductase chain 4; n=1; Litopenaeus vannamei|Rep:
NADH-ubiquinone oxidoreductase chain 4 - Penaeus
vannamei (Penoeid shrimp) (European white shrimp),
partial (4%)
Length = 580
Score = 165 bits (83), Expect = 1e-40
Identities = 95/99 (95%)
Strand = Plus / Minus
Query: 56 cagttcctaatggacgggaccgattcctcagttcgccatccacctatctcccctacctcg 115
||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||
Sbjct: 279 cagttcctaatggacggaacagattcctcagttcgccatctacctatctcccctacctcg 220
Query: 116 cacgtcgccggagccctcagggtcttcacctcgtcgccg 154
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 219 cacgccgccggagccctcagggtcttcacctcgtcgccg 181
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 209 ggggtttaagagagggccttgcgatgtaat 238
|||||| |||||||||||||||||||||||
Sbjct: 151 ggggttaaagagagggccttgcgatgtaat 122
>gnl|LJGI|TC68847 UniRef100_A9TQA4 Cluster: Predicted protein; n=1; Physcomitrella
patens subsp. patens|Rep: Predicted protein -
Physcomitrella patens subsp. patens, partial (12%)
Length = 773
Score = 165 bits (83), Expect = 1e-40
Identities = 95/99 (95%)
Strand = Plus / Minus
Query: 56 cagttcctaatggacgggaccgattcctcagttcgccatccacctatctcccctacctcg 115
||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||
Sbjct: 346 cagttcctaatggacggaacagattcctcagttcgccatctacctatctcccctacctcg 287
Query: 116 cacgtcgccggagccctcagggtcttcacctcgtcgccg 154
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 286 cacgccgccggagccctcagggtcttcacctcgtcgccg 248
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 209 ggggtttaagagagggccttgcgatgtaat 238
|||||| |||||||||||||||||||||||
Sbjct: 219 ggggttaaagagagggccttgcgatgtaat 190
>gnl|LJGI|TC69937 similar to UniRef100_Q3HY29 Cluster: Cyclooxygenase 1b2; n=1; Homo
sapiens|Rep: Cyclooxygenase 1b2 - Homo sapiens (Human),
partial (3%)
Length = 1257
Score = 79.8 bits (40), Expect = 7e-15
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 95 ccacctatctcccctacctcgcacgtcgccggagccctcagggtcttcacctcgtcgccg 154
|||| |||||||||||||||| ||| || ||||||||| |||||||| ||||||| ||||
Sbjct: 264 ccacttatctcccctacctcgtacgccgtcggagccctaagggtctttacctcgttgccg 205
Query: 155 atgccgatgccg 166
|||| |||||||
Sbjct: 204 atgcagatgccg 193