Miyakogusa Predicted Gene
- Lj3g3v0526200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0526200.1 Non Chatacterized Hit- tr|I1JMS6|I1JMS6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,69.45,0,seg,NULL;
Mem_trans,Auxin efflux carrier; FAMILY NOT NAMED,NULL,CUFF.40930.1
(1155 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62085 weakly similar to UniRef100_A7QSR5 Cluster: Chr... 1150 0.0
gnl|LJGI|BP064801 similar to UniRef100_A7QSR5 Cluster: Chromosom... 147 2e-34
gnl|LJGI|TC73844 weakly similar to UniRef100_A7QSR6 Cluster: Chr... 147 2e-34
gnl|LJGI|BP065565 weakly similar to UniRef100_A7QSR5 Cluster: Ch... 101 9e-21
gnl|LJGI|CB829147 weakly similar to UniRef100_A7QSR5 Cluster: Ch... 82 9e-15
>gnl|LJGI|TC62085 weakly similar to UniRef100_A7QSR5 Cluster: Chromosome chr4
scaffold_162, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (43%)
Length = 692
Score = 1150 bits (580), Expect = 0.0
Identities = 586/588 (99%)
Strand = Plus / Plus
Query: 568 gaatgtacaatgcctgttgagccagcagaggtgcgcaaaagtgggaaaattatgaaacaa 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaatgtacaatgcctgttgagccagcagaggtgcgcaaaagtgggaaaattatgaaacaa 61
Query: 628 ctgaaaatattagctgaaaagatcaatctgaaggtattgtttgcacctgcaacgaccgga 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctgaaaatattagctgaaaagatcaatctgaaggtattgtttgcacctgcaacgaccgga 121
Query: 688 gcgattgttggtttaataattggtgcagttcctccatttcgaaatctattagttggtgac 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcgattgttggtttaataattggtgcagttcctccatttcgaaatctattagttggtgac 181
Query: 748 aatgctcctctccgtgtggttgaagactcggtaattatgctaggagctgcaggcattcca 807
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 182 aatgctcctctccgtgtggttgaagactcggtaattatgctaggagctgcaggtattcca 241
Query: 808 gcaatgacattgttggttggggcaaatcttattaagggtttaaaaggagtaaggaagcag 867
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 242 gcaatgacattgttggttggggcaaatcttattaagggtttaaaaggagtaaggaaacag 301
Query: 868 cttccagttattgttggcattgttgtggttagatttattgccttgccaataataggcata 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cttccagttattgttggcattgttgtggttagatttattgccttgccaataataggcata 361
Query: 928 ggcattgttaaaggtgcagtgcatcttggattgatccacaatgatccattgtaccagttt 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggcattgttaaaggtgcagtgcatcttggattgatccacaatgatccattgtaccagttt 421
Query: 988 cttttgctgcttcaatttgcccttccacctgcagtagctatcagtacaatcactcaatta 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cttttgctgcttcaatttgcccttccacctgcagtagctatcagtacaatcactcaatta 481
Query: 1048 tttggagctggtgagggtgaatgctcagttatcatgttagcaacttattcttgttctgca 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tttggagctggtgagggtgaatgctcagttatcatgttagcaacttattcttgttctgca 541
Query: 1108 gtttcacttacactttggtgcaccttctttatgtggcttgtattataa 1155
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtttcacttacactttggtgcaccttctttatgtggcttgtattataa 589
>gnl|LJGI|BP064801 similar to UniRef100_A7QSR5 Cluster: Chromosome chr4 scaffold_162,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_162, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 228
Score = 147 bits (74), Expect = 2e-34
Identities = 77/78 (98%)
Strand = Plus / Minus
Query: 1078 atcatgttagcaacttattcttgttctgcagtttcacttacactttggtgcaccttcttt 1137
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 atcatgttagcaacgtattcttgttctgcagtttcacttacactttggtgcaccttcttt 169
Query: 1138 atgtggcttgtattataa 1155
||||||||||||||||||
Sbjct: 168 atgtggcttgtattataa 151
>gnl|LJGI|TC73844 weakly similar to UniRef100_A7QSR6 Cluster: Chromosome chr4
scaffold_162, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 973
Score = 147 bits (74), Expect = 2e-34
Identities = 302/378 (79%)
Strand = Plus / Plus
Query: 49 atggtattttttgtcttcgctcctactcttgtttgtagcagcctagctgaaacaataacc 108
||||||| ||||||||| |||| ||||| ||||||||||||| ||| |||| |||||
Sbjct: 330 atggtatattttgtctttactccagctcttatttgtagcagcctggctcaaactataact 389
Query: 109 tttaagagcttggttatgttatggttcatgccggggaatgttcttctgacatttataatc 168
|||| |||| |||||||| | |||||||||||| |||| |||||| |||| | | ||
Sbjct: 390 tttaggagcatggttatgctgtggttcatgccgctaaatgctcttctaacatatgttatt 449
Query: 169 ggtacggttcttggatggttactactcaaaacaactagagttcctcatcatcttcagggc 228
|| | | ||||||||||||||| | | |||||||||||| ||| |||||||||| |||
Sbjct: 450 gggatagctcttggatggttacttattagaacaactagagtaccttatcatcttcaaggc 509
Query: 229 cttgtgttggggtgctgtgctgcaggaaatctaggaaatttacctcttattattgtccca 288
||||| || ||||| ||| ||||||||||| | || | ||| |||||||| || |||| |
Sbjct: 510 cttgtattagggtgttgttctgcaggaaatttgggcactttgcctcttatcatagtccaa 569
Query: 289 gctgtatgtaaagaaagaagcaatccttttggagatgtgggtgtttgctatagaaatgct 348
||| | |||||||||||| || ||||||||||||| || || |||| | |||
Sbjct: 570 gctatctgtaaagaaagagaaaacccttttggagatgaggatgattgcatccgtcatgga 629
Query: 349 ctagcatatgcttctttatcaatggcactaggatcagtttacacttggtcttatgtgtac 408
|||| |||| ||||| || |||||||||||||| |||| |||||||| |||||||
Sbjct: 630 ctagaatatacttctataacaatggcactaggacacatttatgcttggtctattgtgtac 689
Query: 409 aacattatccgcatatat 426
|||||| |||||||||||
Sbjct: 690 aacattgtccgcatatat 707
Score = 56.0 bits (28), Expect = 5e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 616 attatgaaacaactgaaaatattagctgaaaagatcaatctgaaggtattgtttgcacct 675
||||||||||| |||||| ||||||||| |||||||| |||||||| | |||||||||
Sbjct: 897 attatgaaacaggtgaaaacattagctgacaagatcaacctgaaggtcctatttgcacct 956
>gnl|LJGI|BP065565 weakly similar to UniRef100_A7QSR5 Cluster: Chromosome chr4
scaffold_162, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 536
Score = 101 bits (51), Expect = 9e-21
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 1051 ggagctggtgagggtgaatgctcagttatcatgttagcaacttattcttgttctgcagtt 1110
|||| |||| || |||||||||||||||||||||||||||||||||| | |||| |||||
Sbjct: 299 ggagttggtcagagtgaatgctcagttatcatgttagcaacttattcctcttctacagtt 240
Query: 1111 tcacttacactttggtgcaccttctttatgtggcttgt 1148
| ||||| || |||||||| ||||||||||||||||
Sbjct: 239 ttgcttactctctggtgcacnatctttatgtggcttgt 202
>gnl|LJGI|CB829147 weakly similar to UniRef100_A7QSR5 Cluster: Chromosome chr4
scaffold_162, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 559
Score = 81.8 bits (41), Expect = 9e-15
Identities = 104/125 (83%)
Strand = Plus / Plus
Query: 616 attatgaaacaactgaaaatattagctgaaaagatcaatctgaaggtattgtttgcacct 675
||||||||||| |||||| ||||||||| |||||||| |||||||| | |||||||||
Sbjct: 423 attatgaaacaggtgaaaacattagctgacaagatcaacctgaaggtcctatttgcacct 482
Query: 676 gcaacgaccggagcgattgttggtttaataattggtgcagttcctccatttcgaaatcta 735
|| | |||||||||| |||||| |||||||||||||||||| ||||| ||| |||
Sbjct: 483 tcatcattgggagcgattgctggtttgttaattggtgcagttcctcaatttcaaaaacta 542
Query: 736 ttagt 740
||||
Sbjct: 543 ctagt 547