Miyakogusa Predicted Gene

Lj3g3v0525170.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0525170.1 Non Chatacterized Hit- tr|I1HV22|I1HV22_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,57.89,3e-19,seg,NULL,CUFF.40927.1
         (261 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67242 similar to UniRef100_A7PQV8 Cluster: Chromosome...   509   e-144

>gnl|LJGI|TC67242 similar to UniRef100_A7PQV8 Cluster: Chromosome chr6 scaffold_25,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_25, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 793

 Score =  509 bits (257), Expect = e-144
 Identities = 260/261 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtctttattcttggttggcttcaattgatgaaagaaaattttgggggtggttgttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atgagtctttattcttggttggcttcaattgatgaaagaaaattttgggggtggttgttg 254

                                                                       
Query: 61  gtgtcaattggctctgtgttctttgttggattcttctttgttgctgttatttccaagctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 255 gtgtcaattggctctgtgttctttgttggattcttctttgttgctgttatttccaagctt 314

                                                                       
Query: 121 ctgcctccttctcagattgcaatgatatctgcaatgcaaaatgactggtactactgcttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctgcctccttctcagattgcaatgatatctgcaatgcaaaatgactggtactactgcttc 374

                                                                       
Query: 181 ttagtgccattgactatccctatactttttgttgctgtgtacttccattggctcagcatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttagtgccattgactatccctatactttttgttgctgtgtacttccattggctcagcatg 434

                                
Query: 241 aagctgttcaagcatgcttag 261
           |||||||||||||||||||||
Sbjct: 435 aagctgttcaagcatgcttag 455