Miyakogusa Predicted Gene
- Lj3g3v0514040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0514040.1 Non Chatacterized Hit- tr|A5AP35|A5AP35_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.86,0.000000000000007,PsbQ,Photosystem II PsbQ, oxygen evolving
complex; seg,NULL; no description,NULL; Oxygen-evolving
en,CUFF.40966.1
(705 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57272 similar to UniRef100_A7R221 Cluster: Chromosome... 1245 0.0
gnl|LJGI|AV411586 homologue to UniRef100_A7R221 Cluster: Chromos... 174 5e-43
gnl|LJGI|AV425791 similar to UniRef100_O22591 Cluster: Oxygen-ev... 167 1e-40
>gnl|LJGI|TC57272 similar to UniRef100_A7R221 Cluster: Chromosome undetermined
scaffold_394, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_394,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (96%)
Length = 843
Score = 1245 bits (628), Expect = 0.0
Identities = 680/705 (96%)
Strand = Plus / Plus
Query: 1 atggcacaagcaatggcatcaatggctggtttacgtggttcatctcaagctgtgttggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atggcacaagcaatggcatcaatggctggtttacgtggttcatctcaagctgtgttggaa 109
Query: 61 ggaagcctccaactaagtggctcaacacgcttgaacatccacagtnnnnnnnnnnnnnnn 120
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ggaagcctccaactaagtggctcaacacgcttgaacatccacagtagcagcagcagcagc 169
Query: 121 nnnnnnnngttgtcctcaacaaggctcactgttagagccaaccaggttccttctgagcca 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 aacagcagggtgtcctcaacaaggctcactgttagagccaaccaggttccttctgagcca 229
Query: 181 cagattagccgcagggcagtgatgggtcttgttgctgctggtttggccactggttccttt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 cagagtagccgcagggcagtgatgggtcttgttgctgctggtttggccactggttccttt 289
Query: 241 gttcaagctgttcttgctgaagctaagtccatcaaagttggtggtcctcccccgctttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gttcaagctgttcttgctgaagctaagtccatcaaagttggtggtcctcccccgctttcc 349
Query: 301 ggcggtctccctggaacactgaactcagatgaagcaagagaccttgagctgccactgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggcggtctccctggaacactgaactcagatgaagcaagagaccttgagctgccactgaaa 409
Query: 361 gaaaggtttttcctgcaaccattgtcccctactgaggcagcacaaagggcaaaggagtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gaaaggtttttcctgcaaccattgtcccctactgaggcagcacaaagggcaaaggagtca 469
Query: 421 gccaaggaaattgttgctgttaagaagtttattgaccagaaggcttggccatatgttcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gccaaggaaattgttgctgttaagaagtttattgaccagaaggcttggccatatgttcag 529
Query: 481 aacgatctgcgcctgagggcttcgtatcttcgttatgaccttaacactgtcatctcttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aacgatctgcgcctgagggcttcgtatcttcgttatgaccttaacactgtcatctcttca 589
Query: 541 aagcctaaggaccagaaacaatccctcaaggaacttagtgcaaagctcttccaggatatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aagcctaaggaccagaaacaatccctcaaggaacttagtgcaaagctcttccaggatatc 649
Query: 601 agcaatctggattatgcagccaaagtcaagagctccccacaagcagagaagtactatgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 agcaatctggattatgcagccaaagtcaagagctccccacaagcagagaagtactatgct 709
Query: 661 gaggctgtatctactctgaatgatgtccttggcaaacttggttaa 705
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gaggctgtatctactctgaatgatgtccttggcaaacttggttaa 754
>gnl|LJGI|AV411586 homologue to UniRef100_A7R221 Cluster: Chromosome undetermined
scaffold_394, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_394,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 177
Score = 174 bits (88), Expect = 5e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 atggcacaagcaatggcatcaatggctggtttacgtggttcatctcaagctgtgttggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atggcacaagcaatggcatcaatggctggtttacgtggttcatctcaagctgtgttggaa 149
Query: 61 ggaagcctccaactaagtggctcaacac 88
||||||||||||||||||||||||||||
Sbjct: 150 ggaagcctccaactaagtggctcaacac 177
>gnl|LJGI|AV425791 similar to UniRef100_O22591 Cluster: Oxygen-evolving enhancer
protein 3, chloroplast precursor; n=1; Onobrychis
viciifolia|Rep: Oxygen-evolving enhancer protein 3,
chloroplast precursor - Onobrychis viciifolia (Common
sainfoin), partial (12%)
Length = 226
Score = 167 bits (84), Expect = 1e-40
Identities = 84/84 (100%)
Strand = Plus / Minus
Query: 622 aaagtcaagagctccccacaagcagagaagtactatgctgaggctgtatctactctgaat 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 aaagtcaagagctccccacaagcagagaagtactatgctgaggctgtatctactctgaat 167
Query: 682 gatgtccttggcaaacttggttaa 705
||||||||||||||||||||||||
Sbjct: 166 gatgtccttggcaaacttggttaa 143