Miyakogusa Predicted Gene
- Lj3g3v0513020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0513020.1 CUFF.40919.1
(946 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO015065 UniRef100_Q0S6I0 Cluster: Transcriptional regu... 224 8e-58
gnl|LJGI|TC63092 similar to UniRef100_A7P5Q0 Cluster: Chromosome... 78 1e-13
gnl|LJGI|FS356630 weakly similar to UniRef100_A7P5Q0 Cluster: Ch... 52 6e-06
>gnl|LJGI|GO015065 UniRef100_Q0S6I0 Cluster: Transcriptional regulator, IclR family
protein; n=1; Rhodococcus sp. RHA1|Rep: Transcriptional
regulator, IclR family protein - Rhodococcus sp. (strain
RHA1), partial (6%)
Length = 919
Score = 224 bits (113), Expect = 8e-58
Identities = 215/249 (86%)
Strand = Plus / Minus
Query: 457 aactggtttctgtgctttggttgctttccgcgcttcaaaatattccagtgtcgcttgcag 516
||||||||| | ||| |||||||| |||| ||||||| | |||||||||||||||||
Sbjct: 516 aactggtttttatgccttggttgcattccaggcttcaagtttttccagtgtcgcttgcaa 457
Query: 517 atccctcaattcatagtaacacaaacaacagaatgtgttgtgaggaatctcattgccttg 576
|| |||||||||| || |||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 456 atgcctcaattcaaagcaacacaaacaacagaatgtgttttgaggaacctcattgccttg 397
Query: 577 gagcaatgtcactattcagaccaacccttcatctgcaactatgtttctctaattgactct 636
||||||||||||||||| |||||||| |||||||||| |||||||||||| ||||| |||
Sbjct: 396 gagcaatgtcactattctgaccaacctttcatctgcagctatgtttctctcattgattct 337
Query: 637 ctgatttacactaaacaggatgtggagttgctggttgacaaagaagtaattgtccatgaa 696
|| | || |||| ||||||||| ||||| |||||||||||| | ||||| ||||||
Sbjct: 336 cttgtcaactctaatcaggatgtgtcattgcttgttgacaaagaaatcattgttcatgaa 277
Query: 697 cttgccagc 705
|||| ||||
Sbjct: 276 cttggcagc 268
>gnl|LJGI|TC63092 similar to UniRef100_A7P5Q0 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 806
Score = 77.8 bits (39), Expect = 1e-13
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 9 atgttcaccacatcatggattttcaagatcacccaaagggacttgttgctgcttgaaaac 68
|||||||| |||||||||||||||||| || ||| || ||||||||||| ||||||||
Sbjct: 585 atgttcacaacatcatggattttcaagggcatccagagagacttgttgctccttgaaaat 644
Query: 69 cagcttcccatgttt 83
|||||||| ||||||
Sbjct: 645 cagcttccaatgttt 659
>gnl|LJGI|FS356630 weakly similar to UniRef100_A7P5Q0 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 730
Score = 52.0 bits (26), Expect = 6e-06
Identities = 125/158 (79%)
Strand = Plus / Minus
Query: 541 acaacagaatgtgttgtgaggaatctcattgccttggagcaatgtcactattcagaccaa 600
||||||||||||||| | ||||| || || ||||| ||||| || |||||| | || |
Sbjct: 471 acaacagaatgtgttcttaggaacctaatagcctttgagcagtgccactatcctgaggag 412
Query: 601 cccttcatctgcaactatgtttctctaattgactctctgatttacactaaacaggatgtg 660
|| | ||| ||||| ||||||||| |||| ||||||| ||| ||| ||| | ||||
Sbjct: 411 ccttacatttgcaattatgtttctgtaatcaactctcttattcgcaccaaagatgatgca 352
Query: 661 gagttgctggttgacaaagaagtaattgtccatgaact 698
|| |||||||||| ||||||| ||||||||||||||
Sbjct: 351 gaactgctggttgagaaagaagccattgtccatgaact 314