Miyakogusa Predicted Gene
- Lj3g3v0513000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0513000.1 Non Chatacterized Hit- tr|I3SVT2|I3SVT2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.57,0,DUF247,Protein of unknown function DUF247, plant; FAMILY
NOT NAMED,NULL,CUFF.40917.1
(1386 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO015065 UniRef100_Q0S6I0 Cluster: Transcriptional regu... 1649 0.0
gnl|LJGI|TC63092 similar to UniRef100_A7P5Q0 Cluster: Chromosome... 1179 0.0
gnl|LJGI|FS330417 weakly similar to UniRef100_O22159 Cluster: Ex... 54 2e-06
>gnl|LJGI|GO015065 UniRef100_Q0S6I0 Cluster: Transcriptional regulator, IclR family
protein; n=1; Rhodococcus sp. RHA1|Rep: Transcriptional
regulator, IclR family protein - Rhodococcus sp. (strain
RHA1), partial (6%)
Length = 919
Score = 1649 bits (832), Expect = 0.0
Identities = 882/891 (98%), Gaps = 7/891 (0%)
Strand = Plus / Minus
Query: 496 ggcatccagagagacttgttgctccttgaaaatcagcttccaatgtttctcttggaagca 555
||||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||
Sbjct: 896 ggcatccagagagacttgt-gctcctg--aaatcagcttccaatgtt-ctct-ggaagca 842
Query: 556 ttacatagaaaagtttacaatggaaattgtcaaagttttgttgagcttgcagtgaactac 615
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 t-acatagaaaagtt-acaatggaaattgtcaaagttttgttgagcttgcagtgaactac 784
Query: 616 tttgaagattatattccacaaagttcaacaaatgatcaaatcaaagaagtgatgatcaat 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 tttgaagattatattccacaaagttcaacaaatgatcaaatcaaagaagtgatgatcaat 724
Query: 676 aacttttgtcacttcactgatttgattagaagtttctaccttccaaaagaagttcaggag 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 aacttttgtcacttcactgatttgattagaagtttctaccttccaaaagaagttcaggag 664
Query: 736 aaagggtgggagccatcaaagcatttcacccctgaaaacaaacgcatccttaaaactgca 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aaagggtgggagccatcaaagcatttcacccctgaaaacaaacgcatccttaaaactgca 604
Query: 796 acaaggcttttcgaagcaggggttacctttgaggtagttcacaatagagccatgttagaa 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 acaaggcttttcgaagcaggggttacctttgaggtagttcacaatagagccatgttagaa 544
Query: 856 ataaagtttaagaggattcaagtttcgaactggtttttatgccttggttgcattccaggc 915
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 543 ataaagtttaagaggattcaagttttgaactggtttttatgccttggttgcattccaggc 484
Query: 916 ttcaagtttttccagtgtcgcttgcaaatgcctcaattcaaagcaacacaaacaacagaa 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttcaagtttttccagtgtcgcttgcaaatgcctcaattcaaagcaacacaaacaacagaa 424
Query: 976 tgtgttttgaggaacctcattgccttggagcaatgtcactattctgaccaacctttcatc 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgtgttttgaggaacctcattgccttggagcaatgtcactattctgaccaacctttcatc 364
Query: 1036 tgcagctatgtttctctcattgattctcttgtcaactctaatcaggatgtgtcattgctt 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgcagctatgtttctctcattgattctcttgtcaactctaatcaggatgtgtcattgctt 304
Query: 1096 gttgacaaagaaatcattgttcatgaacttggcagcaatcaagaacttgcagaaatgaca 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gttgacaaagaaatcattgttcatgaacttggcagcaatcaagaacttgcagaaatgaca 244
Query: 1156 aatggtctttgcaagaatgttgtggtgacaaataattattatggcaagatttcaaggaaa 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aatggtctttgcaagaatgttgtggtgacaaataattattatggcaagatttcaaggaaa 184
Query: 1216 ctcaatgatcactactattgcaaatggaagcgttatatgggaatgttaacatcagtgtac 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ctcaatgatcactactattgcaaatggaagcgttatatgggaatgttaacatcagtgtac 124
Query: 1276 ttccgtgatccttggagaatcagctcaactgctgtgggaattgtgtttttcgtgtttgct 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttccgtgatccttggagaatcagctcaactgctgtgggaattgtgtttttcgtgtttgct 64
Query: 1336 attatgaactttctccgtcttgttgatttatataaaccaaaacaccattaa 1386
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 attatgaactttctccgtcttgttgatttatataaaccaaaacaccattaa 13
>gnl|LJGI|TC63092 similar to UniRef100_A7P5Q0 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 806
Score = 1179 bits (595), Expect = 0.0
Identities = 684/701 (97%), Gaps = 12/701 (1%)
Strand = Plus / Plus
Query: 1 atgccttcttctgcttctactggttacactgctgaacatgaaacagaaccacagattgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atgccttcttctgcttctactggttacactgctgaacatgaaacagaaccacagattgaa 176
Query: 61 cacataattgacatttctaaagatattgggccagcaatgcatgatttgtgttgcatttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cacataattgacatttctaaagatattgggccagcaatgcatgatttgtgttgcatttac 236
Query: 121 aaggtcccttccaatctccggaaggtgaatgatggagaagcctatgaaccacacttgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 aaggtcccttccaatctccggaaggtgaatgatggagaagcctatgaaccacacttgata 296
Query: 181 tcaattggccctttacaccacaacatgcctaaacttgaatcaatgcataaacagaagcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcaattggccctttacaccacaacatgcctaaacttgaatcaatgcataaacagaagcaa 356
Query: 241 aggtattttctttccttctggggacgtgtaacaaacaaaaagtctttagaaaactacaaa 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 357 aggtattttctttccttctggggacgtgtaacaaacaaaaagcctttagaaaactacaaa 416
Query: 301 gacttcctcaaagaaaacactgacacgattcgccattattactctgagctagataataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gacttcctcaaagaaaacactgacacgattcgccattattactctgagctagataataat 476
Query: 361 agccccatcaatgaaaatgaatttgtggacatgatcctgttagattctgtcttcatcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agccccatcaatgaaaatgaatttgtggacatgatcctgttagattctgtcttcatcttg 536
Query: 421 gagctgtttctgagaaattcagatcaatctgaaaggaaaaaggattacatgttcacaaca 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gagcagtttctgagaaattcagatcaatctgaaaggaaaaaggattacatgttcacaaca 596
Query: 481 tcatggattttcaagggcatccagagagacttgttgctccttgaaaatcagcttccaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tcatggattttcaagggcatccagagagacttgttgctccttgaaaatcagcttccaatg 656
Query: 541 tttctcttggaagcattacatagaaaagtttacaatggaaattgtcaaagttttgttgag 600
|||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||
Sbjct: 657 tttctcttggaagcattacatagaaaag-ttacaatggaaattgccaaag-tttgttgag 714
Query: 601 cttgcagtgaactactttgaagattatattccacaaagttcaacaaatgatcaaatcaaa 660
||||||||| ||||||||| ||| |||||||||| ||||||| |||||||||||||||
Sbjct: 715 cttgcagtg-actactttg-aga-tatattccac-aagttca--caatgatcaaatcaaa 768
Query: 661 gaagtgatgatcaataacttttgtcacttcactgatttgat 701
| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 769 g-agtgatgatca--tacttttgtcac-tcactgatttgat 805
>gnl|LJGI|FS330417 weakly similar to UniRef100_O22159 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (10%)
Length = 765
Score = 54.0 bits (27), Expect = 2e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 380 aatttgtggacatgatcctgttagattctgtcttcatcttggagctgtttctgag 434
|||||||| ||||||| |||| ||| |||| |||||| ||||||||||||||||
Sbjct: 488 aatttgtgcacatgataatgttggatgctgttttcatcatggagctgtttctgag 542