Miyakogusa Predicted Gene
- Lj3g3v0512950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0512950.1 tr|B9MV27|B9MV27_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_781316 PE=4
SV=1,34,0.000000008,FAMILY NOT NAMED,NULL; DUF247,Protein of unknown
function DUF247, plant,gene.g45607.t1.1
(1101 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS356630 weakly similar to UniRef100_A7P5Q0 Cluster: Ch... 1322 0.0
gnl|LJGI|FS330417 weakly similar to UniRef100_O22159 Cluster: Ex... 809 0.0
gnl|LJGI|DC597230 similar to UniRef100_A7PP25 Cluster: Chromosom... 62 8e-09
gnl|LJGI|TC58936 similar to UniRef100_A7PP25 Cluster: Chromosome... 62 8e-09
>gnl|LJGI|FS356630 weakly similar to UniRef100_A7P5Q0 Cluster: Chromosome chr4
scaffold_6, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 730
Score = 1322 bits (667), Expect = 0.0
Identities = 667/667 (100%)
Strand = Plus / Minus
Query: 435 agaaagaaagtttgagcaaaagaagtgggagaaatctctacatttcactgatttggttag 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 agaaagaaagtttgagcaaaagaagtgggagaaatctctacatttcactgatttggttag 671
Query: 495 atatacctatctacccatgaaactgagcactcagcacaaaaattctgagaaagagtgtgt 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 atatacctatctacccatgaaactgagcactcagcacaaaaattctgagaaagagtgtgt 611
Query: 555 gctactgaggactgcaacaaagttgagtaaggttggggtgagctttgagaaggttcataa 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gctactgaggactgcaacaaagttgagtaaggttggggtgagctttgagaaggttcataa 551
Query: 615 tagatgcttacttgacataaagtttgagaagaaaatcttcagagctccacttcaaatccc 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tagatgcttacttgacataaagtttgagaagaaaatcttcagagctccacttcaaatccc 491
Query: 675 ccagctaaaagtggaccacacaacagaatgtgttcttaggaacctaatagcctttgagca 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ccagctaaaagtggaccacacaacagaatgtgttcttaggaacctaatagcctttgagca 431
Query: 735 gtgccactatcctgaggagccttacatttgcaattatgtttctgtaatcaactctcttat 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtgccactatcctgaggagccttacatttgcaattatgtttctgtaatcaactctcttat 371
Query: 795 tcgcaccaaagatgatgcagaactgctggttgagaaagaagccattgtccatgaactgag 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcgcaccaaagatgatgcagaactgctggttgagaaagaagccattgtccatgaactgag 311
Query: 855 aagtgatgaagatctggcaactctggttaacagtctttgcaaaaatgttgtcacaaattc 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aagtgatgaagatctggcaactctggttaacagtctttgcaaaaatgttgtcacaaattc 251
Query: 915 aacatgttaccgcaaggttatggaagatctcaatgaacactataacagtgattggaacag 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aacatgttaccgcaaggttatggaagatctcaatgaacactataacagtgattggaacag 191
Query: 975 gactctgggtacattaaagtgggtttacttcaaagacccttggagaagcagttctactgt 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gactctgggtacattaaagtgggtttacttcaaagacccttggagaagcagttctactgt 131
Query: 1035 gttggggattgcggtcctaatattcatcatcttcacattgtgtcgtattatcagtgattt 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gttggggattgcggtcctaatattcatcatcttcacattgtgtcgtattatcagtgattt 71
Query: 1095 cctttag 1101
|||||||
Sbjct: 70 cctttag 64
>gnl|LJGI|FS330417 weakly similar to UniRef100_O22159 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (10%)
Length = 765
Score = 809 bits (408), Expect = 0.0
Identities = 422/429 (98%)
Strand = Plus / Plus
Query: 1 atgcaagagcagaaacaaagatactttcatttcttttgggaacgcctatttaggaaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atgcaagagcagaaacaaagatactttcatttcttttgggaacgcctatttaggaaacat 396
Query: 61 gatttaataagttacaaagccttccttgaacaagaagagcaaaacatacgacactgttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gatttaataagttacaaagccttccttgaacaagaagagcaaaacatacgacactgttac 456
Query: 121 caaaagaaattccctgatatcagcaagcaacaatttgtgcacatgataatgttggatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 caaaagaaattccctgatatcagcaagcaacaatttgtgcacatgataatgttggatgct 516
Query: 181 gttttcatcatggagctgtttctgagggaagcnnnnnnntgggaccacaaagatgatcct 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 517 gttttcatcatggagctgtttctgagggaagcaaaaaaatgggaccacaaagatgatcct 576
Query: 241 gtagtaactcaaccatgtcttggcaaaactatccagcgtgacttgttgctacttgagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gtagtaactcaaccatgtcttggcaaaactatccagcgtgacttgttgctacttgagaat 636
Query: 301 cagcttccaatttatgtgttggagaaactatttgatacagttgtgccacaaaacagtgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 cagcttccaatttatgtgttggagaaactatttgatacagttgtgccacaaaacagtgtc 696
Query: 361 aaaatgcatacgcgatttgtgacgcttgcacaccaatacttagcatcttgttacccttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 aaaatgcatacgcgatttgtgacgcttgcacaccaatacttagcatcttgttacccttat 756
Query: 421 caggaatta 429
|||||||||
Sbjct: 757 caggaatta 765
>gnl|LJGI|DC597230 similar to UniRef100_A7PP25 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 577
Score = 61.9 bits (31), Expect = 8e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 125 agaaattccctgatatcagcaagcaacaatttgtgcacatgataatgttggatgctgttt 184
||||||||| ||| |||| |||| | | |||||| |||||||| | |||||| ||||||
Sbjct: 423 agaaattccatgacatcaacaaggagaagtttgtggacatgatacttttggattctgttt 482
Query: 185 tcatcatggagctgtttctgagg 207
||||||||||||| || ||||||
Sbjct: 483 tcatcatggagctcttgctgagg 505
>gnl|LJGI|TC58936 similar to UniRef100_A7PP25 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 767
Score = 61.9 bits (31), Expect = 8e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 125 agaaattccctgatatcagcaagcaacaatttgtgcacatgataatgttggatgctgttt 184
||||||||| ||| |||| |||| | | |||||| |||||||| | |||||| ||||||
Sbjct: 574 agaaattccatgacatcaacaaggagaagtttgtggacatgatacttttggattctgttt 633
Query: 185 tcatcatggagctgtttctgagg 207
||||||||||||| || ||||||
Sbjct: 634 tcatcatggagctcttgctgagg 656