Miyakogusa Predicted Gene
- Lj3g3v0489500.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0489500.2 Non Chatacterized Hit- tr|I1LVD6|I1LVD6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33317
PE,83.51,0,seg,NULL; ZF_C3H1,Zinc finger, CCCH-type; CCCH zinc
finger,NULL; zinc finger,Zinc finger, CCCH-type;,CUFF.40904.2
(1407 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58284 similar to UniRef100_A7Q2A5 Cluster: Chromosome... 478 e-134
gnl|LJGI|TC81286 similar to UniRef100_A7Q2A5 Cluster: Chromosome... 369 e-101
gnl|LJGI|GO010087 similar to UniRef100_A7Q2A5 Cluster: Chromosom... 349 3e-95
gnl|LJGI|BW630119 similar to UniRef100_A7Q2A5 Cluster: Chromosom... 202 4e-51
gnl|LJGI|BP063686 homologue to UniRef100_A2Q3L5 Cluster: Zinc fi... 198 7e-50
gnl|LJGI|BP083473 UniRef100_A7Q2A5 Cluster: Chromosome chr13 sca... 180 2e-44
gnl|LJGI|TC72943 similar to UniRef100_A7Q2A5 Cluster: Chromosome... 157 2e-37
gnl|LJGI|TC78964 similar to UniRef100_Q0GIK4 Cluster: Cys-3-His ... 88 2e-16
>gnl|LJGI|TC58284 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 844
Score = 478 bits (241), Expect = e-134
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 31 cttcttttatcagccggtgctgatgtcaactgcgtggatgcgaatggaaatcgagctgtt 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cttcttttatcagccggtgctgatgtcaactgcgtggatgcgaatggaaatcgagctgtt 663
Query: 91 gatgttattgttgtccctcctaagttgcagggcatgaaagcaattcttgaggaactcctc 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gatgttattgttgtccctcctaagttgcagggcatgaaagcaattcttgaggaactcctc 723
Query: 151 tcggacagtgcttctgatggctctgttggtggcatctctgttccggtgtctgtgaattct 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcggacagtgcttctgatggctctgttggtggcatctctgttccggtgtctgtgaattct 783
Query: 211 tctagtcctggttcacctgtgcatttcttgtcacttgaaaatgggatgccatgctctcct 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tctagtcctggttcacctgtgcatttcttgtcacttgaaaatgggatgccatgctctcct 843
Query: 271 t 271
|
Sbjct: 844 t 844
Score = 61.9 bits (31), Expect = 1e-08
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 atggttgctgctacctatggtagcattgatcttct 35
|||||||||||||||||||||||||||||| ||||
Sbjct: 451 atggttgctgctacctatggtagcattgatgttct 485
>gnl|LJGI|TC81286 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1156
Score = 369 bits (186), Expect = e-101
Identities = 186/186 (100%)
Strand = Plus / Plus
Query: 1222 gctgttatgaatcagtttcaacagcttcaaagtacgctgtcgcctataaataccaacatg 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgttatgaatcagtttcaacagcttcaaagtacgctgtcgcctataaataccaacatg 60
Query: 1282 atgtctcctaagaatgttgagcatcctctgttacaggcctcatttggcgttgcttctcct 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtctcctaagaatgttgagcatcctctgttacaggcctcatttggcgttgcttctcct 120
Query: 1342 gggagaatgtcacctagaagtgttgaaccgatctccccaatgggcgctcgactgtcggca 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggagaatgtcacctagaagtgttgaaccgatctccccaatgggcgctcgactgtcggca 180
Query: 1402 tttcct 1407
||||||
Sbjct: 181 tttcct 186
>gnl|LJGI|GO010087 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 194
Score = 349 bits (176), Expect = 3e-95
Identities = 193/196 (98%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 757 gcctctgctgctagtgtcatggacatggctgccgcaatgagccttttgccaggttcacct 816
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctctgctgcta-tgtcatggacatggctgccgcaatgagccttttgccaggttcacct 59
Query: 817 tcgtcaatctcttccatgtctccatcccacttcggccagcccatgtccccatccgcaagt 876
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tc-tcaatctcttccatgtctccatcccacttcggccagcccatgtccccatccgcaagt 118
Query: 877 ggcatctcactctcatctccttcttgggcacaacctaatgtgccggcccttcatttgccc 936
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 119 ggcatctcactctcatctccttcttgggcacaacctaatgtgccgacccttcatttgccc 178
Query: 937 ggaagcaattttcaat 952
||||||||||||||||
Sbjct: 179 ggaagcaattttcaat 194
>gnl|LJGI|BW630119 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 473
Score = 202 bits (102), Expect = 4e-51
Identities = 293/359 (81%)
Strand = Plus / Plus
Query: 650 atggcactagttgcaacagaagggtgtgnnnnnnngctcacactgcagaggagttgcgtc 709
|||||||| ||||||||||||||| || ||||||||| | || ||| ||||||
Sbjct: 1 atggcactgattgcaacagaagggtatgtttttttgctcacactactgaagagctgcgtc 60
Query: 710 cgctgtatgtgtccactggatctgctgttccttcgccacgatcatctgcctctgctgcta 769
| |||||||||||||||| |||||||| ||||| || ||||| |||||||||||| |||
Sbjct: 61 cattgtatgtgtccactgggtctgctgtaccttcaccccgatcttctgcctctgctccta 120
Query: 770 gtgtcatggacatggctgccgcaatgagccttttgccaggttcaccttcgtcaatctctt 829
|||||||||||||||||| |||||||||||| | ||| ||||||| || | || ||||
Sbjct: 121 atgtcatggacatggctgctgcaatgagccttcttccatgttcaccgtcagcgatttctt 180
Query: 830 ccatgtctccatcccacttcggccagcccatgtccccatccgcaagtggcatctcactct 889
|| ||||||||| ||| | ||||| || || ||||| || | |||||| || | ||
Sbjct: 181 atgtggctccatccccctttgcacagccaatatctccatctgccaatggcatgtctcact 240
Query: 890 catctccttcttgggcacaacctaatgtgccggcccttcatttgcccggaagcaattttc 949
||||| || ||||| | || || |||||||| || |||||||| || ||||||||| |||
Sbjct: 241 catctactgcttggccgcagccaaatgtgcctgcgcttcatttaccaggaagcaatattc 300
Query: 950 aatctagtcgcttgaggtcttctcttagtgctcgtgacattccacctgaagacttgaat 1008
|| |||| || ||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 301 aaactagccgtttgagatcttctcttagtgctcgcgacatgccacctgaagacttgaat 359
>gnl|LJGI|BP063686 homologue to UniRef100_A2Q3L5 Cluster: Zinc finger, CCCH-type; n=1;
Medicago truncatula|Rep: Zinc finger, CCCH-type -
Medicago truncatula (Barrel medic), partial (21%)
Length = 514
Score = 198 bits (100), Expect = 7e-50
Identities = 265/320 (82%)
Strand = Plus / Minus
Query: 334 gagaagaaagaatatccaattgatccatcacttcctgatataaaaaatagcatatacact 393
||||||||||||||||| |||||||||| ||||| || || || || |||||||| |
Sbjct: 411 gagaagaaagaatatcctgttgatccatcccttccagacatcaagaacagcatatattca 352
Query: 394 acggatgagtttcggatgttctcattcaaggttcgtccttgttcacgagcatactcccat 453
|| ||||| || ||||||| || ||||||||||| ||||| || || || || || |||
Sbjct: 351 actgatgaattccggatgtattctttcaaggttcggccttgctcccgtgcttattcacat 292
Query: 454 gattggactgagtgtccatttgttcatcctggagagaatgctcgtaggagagatcccaga 513
|||||||| ||||| || ||||||||||| || |||||||||||||| || || ||||||
Sbjct: 291 gattggacagagtgcccttttgttcatccaggggagaatgctcgtagaagggaccccaga 232
Query: 514 aaattccactacagctgtgttccatgccctgattttaggaaaggggcttgtagacgtgga 573
|| | ||| ||||||||||| || || ||||||||| | || || ||||| | || |||
Sbjct: 231 aagtaccattacagctgtgtcccttgtcctgattttcgtaagggtgcttgccggcgagga 172
Query: 574 gatatgtgtgaatatgctcatggagtatttgagtgctggctacacccagctcagtatcgg 633
||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||||
Sbjct: 171 gatatgtgtgaatatgctcatggggtatttgagtgctggctgcatccagcacagtatcga 112
Query: 634 acacgcctctgtaaagatgg 653
|| || ||||| || |||||
Sbjct: 111 actcgtctctgcaaggatgg 92
>gnl|LJGI|BP083473 UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 214
Score = 180 bits (91), Expect = 2e-44
Identities = 136/151 (90%)
Strand = Plus / Minus
Query: 334 gagaagaaagaatatccaattgatccatcacttcctgatataaaaaatagcatatacact 393
||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 152 gagaaaaaagaatatccaattgatccatcacttcctgatataaaaaacagcatatatgcc 93
Query: 394 acggatgagtttcggatgttctcattcaaggttcgtccttgttcacgagcatactcccat 453
|| || |||||||| ||||| |||||||||||||| ||||| || || |||||||| |||
Sbjct: 92 acagacgagtttcgcatgttttcattcaaggttcgcccttgctcccgtgcatactctcat 33
Query: 454 gattggactgagtgtccatttgttcatcctg 484
||||||||||||||||| |||||||||||||
Sbjct: 32 gattggactgagtgtccttttgttcatcctg 2
>gnl|LJGI|TC72943 similar to UniRef100_A7Q2A5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 1189
Score = 157 bits (79), Expect = 2e-37
Identities = 181/215 (84%)
Strand = Plus / Plus
Query: 1096 cgatcttgtcggtctaagatactaactccatcaaatttggaagatctcttttctgctgaa 1155
|||||| || ||||||||| |||||||||||||||| | || ||||| ||||| ||||||
Sbjct: 37 cgatctggttggtctaagacactaactccatcaaatctcgatgatctattttcagctgaa 96
Query: 1156 ttttcttcatctccccgatattctgacccagcaatggcttctgttttttccccaacacac 1215
||||||| ||||| || ||||||||||||||| |||||||| ||||||||||||||
Sbjct: 97 atttcttcgtctcctcggtattctgacccagcagcagcttctgtattttccccaacacat 156
Query: 1216 agatctgctgttatgaatcagtttcaacagcttcaaagtacgctgtcgcctataaatacc 1275
||||| |||||| | |||||||||||||||||||||||| || | || || ||||||||
Sbjct: 157 agatcagctgttctcaatcagtttcaacagcttcaaagttcgttatcacccataaataca 216
Query: 1276 aacatgatgtctcctaagaatgttgagcatcctct 1310
|| | | |||||||| || | ||||||||||||
Sbjct: 217 aatgtcttatctcctaataacggtgagcatcctct 251
>gnl|LJGI|TC78964 similar to UniRef100_Q0GIK4 Cluster: Cys-3-His zinc finger protein;
n=1; Capsicum annuum|Rep: Cys-3-His zinc finger protein
- Capsicum annuum (Bell pepper), partial (59%)
Length = 2650
Score = 87.7 bits (44), Expect = 2e-16
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 445 tactcccatgattggactgagtgtccatttgttcatcctggagagaatgctcgtaggaga 504
||||||||||| |||||||||||||| ||||||||||| || |||||||| | ||||||
Sbjct: 831 tactcccatgactggactgagtgtccttttgttcatccaggggagaatgcaaggaggaga 890
Query: 505 gatcccagaaaattccactacagctgtgttccatgccctgattttaggaaaggggc 560
|| || || |||| || || ||||||||||| |||||||| ||| | ||||||||
Sbjct: 891 gacccaaggaaatacccttatagctgtgttccctgccctgagtttcgcaaaggggc 946