Miyakogusa Predicted Gene
- Lj3g3v0478030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0478030.1 Non Chatacterized Hit- tr|I3T0J2|I3T0J2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.56,0,coiled-coil,NULL; small_GTP: small GTP-binding protein
domain,Small GTP-binding protein domain; no d,CUFF.40878.1
(684 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69578 similar to UniRef100_A7QWW2 Cluster: Chromosome... 1348 0.0
gnl|LJGI|TC67995 weakly similar to UniRef100_Q40520 Cluster: Ras... 454 e-127
gnl|LJGI|TC57539 UniRef100_Q40191 Cluster: Ras-related protein R... 80 2e-14
gnl|LJGI|TC57268 homologue to UniRef100_Q08149 Cluster: GTP-bind... 78 8e-14
gnl|LJGI|TC71887 UniRef100_Q40194 Cluster: Ras-related protein R... 68 8e-11
gnl|LJGI|TC59323 UniRef100_Q40192 Cluster: RAB11B; n=1; Lotus ja... 60 2e-08
gnl|LJGI|TC57476 UniRef100_Q40195 Cluster: Ras-related protein R... 60 2e-08
gnl|LJGI|BW595035 homologue to UniRef100_Q40192 Cluster: RAB11B;... 52 5e-06
>gnl|LJGI|TC69578 similar to UniRef100_A7QWW2 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 1138
Score = 1348 bits (680), Expect = 0.0
Identities = 683/684 (99%)
Strand = Plus / Plus
Query: 1 atggctcaatggcagggtgattcggatgagggtatcgactatatgttcaaggttgtcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atggctcaatggcagggtgattcggatgagggtatcgactatatgttcaaggttgtcatg 209
Query: 61 gttggagactctggggttgggaaatctcagcttttgaataggtttgtgaggaatgagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gttggagactctggggttgggaaatctcagcttttgaataggtttgtgaggaatgagttc 269
Query: 121 caaatgaaatccaaagccacaattggggttgaatttctgaccaagactgttgtcatggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 caaatgaaatccaaagccacaattggggttgaatttctgaccaagactgttgtcatggat 329
Query: 181 cacaaggtagtcaaggcacagatttgggacactgctggtcaagaaaggtaccaggcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cacaaggtagtcaaggcacagatttgggacactgctggtcaagaaaggtaccaggcaatt 389
Query: 241 acaactgcatattacagaggtgcaactggcgcgttactagcatatgacataaccaatcgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 acaactgcatattacagaggtgcaactggcgcgttactagcatatgacataaccaatcgc 449
Query: 301 caatcctttgatcatgttgagaagtggctcgatgagctgcgtgtacatgcagataatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 caatcctttgatcatgttgagaagtggctcgatgagctgcgtgtacatgcagataatata 509
Query: 361 attgtcatgcttgttggcaacaagtctgaccttagttctggtcgagcagtgcctatggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 attgtcatgcttgttggcaacaagtctgaccttagttctggtcgagcagtgcctatggag 569
Query: 421 gaagccaaagacttcgccaaacaaaagggcctcttcttcgtcgagacatcagcacttgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaagccaaagacttcgccaaacaaaagggcctcttcttcgtcgagacatcagcacttgac 629
Query: 481 tccaacaatgtggaatctgctttcctgggtctcctctctcaaatatatgcaacagtcggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tccaacaatgtggaatctgctttcctgggtctcctctctcaaatatatgcaacagtcggt 689
Query: 541 aagaagcacatcattgcagagggagctgagttgaattgggataaagtaaaccttgaactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aagaagcacatcattgcagagggagctgagttgaattgggataaagtaaaccttgaactt 749
Query: 601 gaaggaataaaaattaaggtctcatcacaagaagctgaatgccaaaaagctaaaaggaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 gaaggaataaaaattaaggtctcatcacaagaagctgaatgccaaaaagctaaaaggaga 809
Query: 661 ttcaactgttgcagtgttttttaa 684
||| ||||||||||||||||||||
Sbjct: 810 ttcgactgttgcagtgttttttaa 833
>gnl|LJGI|TC67995 weakly similar to UniRef100_Q40520 Cluster: Ras-related protein
Rab11C; n=1; Nicotiana tabacum|Rep: Ras-related protein
Rab11C - Nicotiana tabacum (Common tobacco), partial
(34%)
Length = 824
Score = 454 bits (229), Expect = e-127
Identities = 229/229 (100%)
Strand = Plus / Minus
Query: 1 atggctcaatggcagggtgattcggatgagggtatcgactatatgttcaaggttgtcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggctcaatggcagggtgattcggatgagggtatcgactatatgttcaaggttgtcatg 262
Query: 61 gttggagactctggggttgggaaatctcagcttttgaataggtttgtgaggaatgagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttggagactctggggttgggaaatctcagcttttgaataggtttgtgaggaatgagttc 202
Query: 121 caaatgaaatccaaagccacaattggggttgaatttctgaccaagactgttgtcatggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatgaaatccaaagccacaattggggttgaatttctgaccaagactgttgtcatggat 142
Query: 181 cacaaggtagtcaaggcacagatttgggacactgctggtcaagaaaggt 229
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cacaaggtagtcaaggcacagatttgggacactgctggtcaagaaaggt 93
>gnl|LJGI|TC57539 UniRef100_Q40191 Cluster: Ras-related protein Rab11A; n=1; Lotus
japonicus|Rep: Ras-related protein Rab11A - Lotus
japonicus, complete
Length = 985
Score = 79.8 bits (40), Expect = 2e-14
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 172 gtcatggatcacaaggtagtcaaggcacagatttgggacactgctggtcaagaaaggtac 231
||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 240 gtcatcgatcacaagaccgtcaaggctcagatctgggacactgctggtcaagaaagatac 299
Query: 232 caggcaattacaactgcatattacagaggtgc 263
||| |||||| |||||||||||| |||||
Sbjct: 300 agagcagttacaagtgcatattacaggggtgc 331
>gnl|LJGI|TC57268 homologue to UniRef100_Q08149 Cluster: GTP-binding protein; n=1;
Pisum sativum|Rep: GTP-binding protein - Pisum sativum
(Garden pea), complete
Length = 1234
Score = 77.8 bits (39), Expect = 8e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 184 aaggtagtcaaggcacagatttgggacactgctggtcaagaaaggtaccaggcaattaca 243
||||| |||||||| || |||||||| |||||||||||||||||||||| ||||| |||
Sbjct: 394 aaggttgtcaaggctcaaatttgggatactgctggtcaagaaaggtaccgagcaataaca 453
Query: 244 actgcatatta 254
| |||||||||
Sbjct: 454 agtgcatatta 464
>gnl|LJGI|TC71887 UniRef100_Q40194 Cluster: Ras-related protein Rab11D; n=1; Lotus
japonicus|Rep: Ras-related protein Rab11D - Lotus
japonicus, complete
Length = 1340
Score = 67.9 bits (34), Expect = 8e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 183 caaggtagtcaaggcacagatttgggacactgctggtcaagaaaggtacc 232
|||||| || ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 462 caaggtcgttaaggctcagatttgggacactgctggtcaggaaaggtacc 511
>gnl|LJGI|TC59323 UniRef100_Q40192 Cluster: RAB11B; n=1; Lotus japonicus|Rep: RAB11B
- Lotus japonicus, complete
Length = 1331
Score = 60.0 bits (30), Expect = 2e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 199 cagatttgggacactgctggtcaagaaaggtaccaggcaattacaactgcatattacaga 258
||||| ||||||||||||||||||||||||||| ||| | |||| |||||| ||||||
Sbjct: 614 cagatctgggacactgctggtcaagaaaggtacagggctgtgacaagtgcatactacaga 673
Query: 259 gg 260
||
Sbjct: 674 gg 675
>gnl|LJGI|TC57476 UniRef100_Q40195 Cluster: Ras-related protein Rab11E; n=1; Lotus
japonicus|Rep: Ras-related protein Rab11E - Lotus
japonicus, complete
Length = 958
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 191 tcaaggcacagatttgggacactgctggtcaagaaaggtacc 232
||||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 254 tcaaggctcagatttgggatactgctggacaagaaaggtacc 295
>gnl|LJGI|BW595035 homologue to UniRef100_Q40192 Cluster: RAB11B; n=1; Lotus
japonicus|Rep: RAB11B - Lotus japonicus, partial (45%)
Length = 462
Score = 52.0 bits (26), Expect = 5e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 199 cagatttgggacactgctggtcaagaaaggtaccaggcaattacaactgcatattacaga 258
||||| ||||| |||||||| |||||||||||| ||| | || | |||||||||||||
Sbjct: 304 cagatctgggatactgctggccaagaaaggtacagggctgtaactagtgcatattacaga 363
Query: 259 ggtgca 264
||||||
Sbjct: 364 ggtgca 369