Miyakogusa Predicted Gene

Lj3g3v0478010.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0478010.1 Non Chatacterized Hit- tr|I3SC15|I3SC15_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,96.51,2e-38,U6
SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM7,NULL; SMALL NUCLEAR
RIBONUCLEOPROTEIN,NULL; Sm-like ribonuc,CUFF.40880.1
         (258 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70953 homologue to UniRef100_A7QWV4 Cluster: Chromoso...   511   e-145

>gnl|LJGI|TC70953 homologue to UniRef100_A7QWV4 Cluster: Chromosome chr13
           scaffold_210, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_210, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (87%)
          Length = 654

 Score =  511 bits (258), Expect = e-145
 Identities = 258/258 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcagggaggaaagaaacggttctggacttggccaaattcgttgacaaaggtgttcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atgtcagggaggaaagaaacggttctggacttggccaaattcgttgacaaaggtgttcaa 252

                                                                       
Query: 61  gttaagctcactggtggcagacaagtgacaggaactctgaaagggtatgaccagttacta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gttaagctcactggtggcagacaagtgacaggaactctgaaagggtatgaccagttacta 312

                                                                       
Query: 121 aaccttgtcctggatgaagctgttgaatttctgagagatcctgatgatccactgaaaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaccttgtcctggatgaagctgttgaatttctgagagatcctgatgatccactgaaaact 372

                                                                       
Query: 181 acagctcagaccagaagtcttggcttaattgtttgtagaggaactgctgtcatgcttgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 acagctcagaccagaagtcttggcttaattgtttgtagaggaactgctgtcatgcttgtt 432

                             
Query: 241 tccccaactgatggtaca 258
           ||||||||||||||||||
Sbjct: 433 tccccaactgatggtaca 450