Miyakogusa Predicted Gene

Lj3g3v0464880.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0464880.1 tr|G7I6K7|G7I6K7_MEDTR DUF246 domain-containing
protein (Fragment) OS=Medicago truncatula GN=MTR_1g0,73.06,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; O-FucT,GDP-fucose
protein O-fucosyltransf,CUFF.40864.1
         (1443 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV420310 similar to UniRef100_A7QWY6 Cluster: Chromosom...   331   7e-90

>gnl|LJGI|AV420310 similar to UniRef100_A7QWY6 Cluster: Chromosome chr13 scaffold_210,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr13 scaffold_210, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (24%)
          Length = 390

 Score =  331 bits (167), Expect = 7e-90
 Identities = 308/355 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1084 tgggtaaggacaggttgtctacctggtctgagccctgagtttgatgagattgtaaagaat 1143
            ||||| ||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 1    tgggtgaggactggttgcctccctggtctgagtcctgagtttgatgagattgtaaacaat 60

                                                                        
Query: 1144 gagaggatacaacggccggagctcttgacaggcagatcaaacatgacttatcatgaaagg 1203
            ||||||||||||  |||  | |||||||| |  ||||||||||||||||| |||||||||
Sbjct: 61   gagaggatacaaaagccaaaactcttgactgctagatcaaacatgacttaccatgaaagg 120

                                                                        
Query: 1204 aagctggctggcctctgccccttgaatgctgttgatgttactaggctgcttaaaggtctt 1263
            ||| ||||||| || || ||||||| |||| | || ||||| ||||| || |||| ||| 
Sbjct: 121  aagatggctggtctttgtcccttgactgctatagaggttaccaggctcctgaaagctcta 180

                                                                        
Query: 1264 ggtgctccaaaaagtgcaagaatttattgggcgggaggacaaccattgggtggaaaagag 1323
            || |||||| ||| | |||||||||||||||| |||||  ||||||||||||||||||| 
Sbjct: 181  ggagctccacaaaattcaagaatttattgggctggagggaaaccattgggtggaaaagaa 240

                                                                        
Query: 1324 gccttgaatccattaatccatgagtttccacatctttacaacaaggaagatcttgccttg 1383
            ||||||  |||||| ||||| ||||| || ||| ||||||||||||||||||||||||||
Sbjct: 241  gccttgcttccattgatccaagagttccctcatttttacaacaaggaagatcttgccttg 300

                                                                   
Query: 1384 cctggagaactggaaccatttgcaaataaagcttctctaatggctgccatagatt 1438
            || |||||||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 301  ccaggagaactagaaccatttgcaaagaaagcttctctaatggcagccatagatt 355