Miyakogusa Predicted Gene

Lj3g3v0429680.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0429680.1 Non Chatacterized Hit- tr|K3XQS7|K3XQS7_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,46.35,2e-18,VQ,VQ; seg,NULL,CUFF.40772.1
         (699 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60663 similar to UniRef100_A7QPU8 Cluster: Chromosome...    82   5e-15
gnl|LJGI|TC62163 similar to UniRef100_Q2HTS9 Cluster: DNA-bindin...    68   8e-11
gnl|LJGI|TC80910 similar to UniRef100_Q1RKR2 Cluster: IP04354p; ...    52   5e-06

>gnl|LJGI|TC60663 similar to UniRef100_A7QPU8 Cluster: Chromosome chr10 scaffold_138,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_138, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (46%)
          Length = 771

 Score = 81.8 bits (41), Expect = 5e-15
 Identities = 112/135 (82%), Gaps = 3/135 (2%)
 Strand = Plus / Plus

                                                                       
Query: 91  atccaaatcccaacaccacctcacaccccaaacaccattcccagatctgactcaaac--- 147
           ||||||||||| ||  |||||||||| ||||| ||  ||||||||||||| || |||   
Sbjct: 256 atccaaatccctacttcacctcacactccaaaaactcttcccagatctgattccaacaac 315

                                                                       
Query: 148 ccttaccccaccacttatgtccaagctgacacttcctctttcaagcaagttgttcaaatg 207
           |||||||||||||||| ||| |||||||||||  || ||||||| || || ||||| |||
Sbjct: 316 ccttaccccaccacttttgttcaagctgacaccaccactttcaaacatgtagttcagatg 375

                          
Query: 208 ctcactggctcatca 222
           || || |||||||||
Sbjct: 376 ctaacaggctcatca 390



 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 275 catcatccagaaacttcaacatccctcccatgaagacagcacc 317
           ||||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 446 catcaaccagaaacttcaacatcccacccatcaaaacagcacc 488


>gnl|LJGI|TC62163 similar to UniRef100_Q2HTS9 Cluster: DNA-binding WRKY; VQ; n=1;
           Medicago truncatula|Rep: DNA-binding WRKY; VQ - Medicago
           truncatula (Barrel medic), partial (44%)
          Length = 1000

 Score = 67.9 bits (34), Expect = 8e-11
 Identities = 78/92 (84%), Gaps = 3/92 (3%)
 Strand = Plus / Plus

                                                                       
Query: 91  atccaaatcccaacaccacctcacaccccaaacaccattcccagatctgactcaaac--- 147
           ||||||||||| ||  |||||||||| ||||| ||  ||||||||||||| || |||   
Sbjct: 210 atccaaatccctacttcacctcacactccaaaaactcttcccagatctgattccaacaac 269

                                           
Query: 148 ccttaccccaccacttatgtccaagctgacac 179
           |||||||||||||||| ||| |||||||||||
Sbjct: 270 ccttaccccaccacttttgttcaagctgacac 301



 Score = 58.0 bits (29), Expect = 8e-08
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                       
Query: 562 tcagaggaggagaaggccatagctgacaagggattctatctacacccatctcccatgtca 621
           |||||||| || || || || ||||| ||||| |||||| | || ||||||||  | |||
Sbjct: 595 tcagaggaagataaagcgattgctgaaaagggtttctatttgcatccatctccagtttca 654

                                                                       
Query: 622 actcccagaggctttgagccacagctcttacctctttttcctgtgacttcacctagagtt 681
           ||||| |||| ||  ||||| ||||| || ||||| |||||| || ||||||||||||||
Sbjct: 655 actcctagagactcagagcctcagcttttgcctctgtttcctctgtcttcacctagagtt 714

                    
Query: 682 acagagtca 690
            ||| ||||
Sbjct: 715 tcagggtca 723



 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 275 catcatccagaaacttcaacatccctcccatgaagacagcacc 317
           ||||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 335 catcaaccagaaacttcaacatcccacccatcaaaacagcacc 377


>gnl|LJGI|TC80910 similar to UniRef100_Q1RKR2 Cluster: IP04354p; n=1; Drosophila
           melanogaster|Rep: IP04354p - Drosophila melanogaster
           (Fruit fly), partial (7%)
          Length = 370

 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 64/76 (84%), Gaps = 3/76 (3%)
 Strand = Plus / Plus

                                                                       
Query: 91  atccaaatcccaacaccacctcacaccccaaacaccattcccagatctgactc---aaac 147
           ||||||||||| ||  |||||||||| ||||| ||  ||||||||||||| ||    |||
Sbjct: 290 atccaaatccctacttcacctcacactccaaaaactcttcccagatctgattccaacaac 349

                           
Query: 148 ccttaccccaccactt 163
           ||||||||||||||||
Sbjct: 350 ccttaccccaccactt 365