Miyakogusa Predicted Gene

Lj3g3v0429530.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0429530.1 Non Chatacterized Hit- tr|C6T3I4|C6T3I4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,87.5,2.5,seg,NULL,NODE_59293_length_654_cov_20.186544.path1.1
         (225 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68714                                                      303   2e-82
gnl|LJGI|BP060110                                                     139   8e-33
gnl|LJGI|TC66408 weakly similar to UniRef100_Q4RWK8 Cluster: Chr...    78   3e-14

>gnl|LJGI|TC68714 
          Length = 560

 Score =  303 bits (153), Expect = 2e-82
 Identities = 153/153 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaagcaaaagcatgagcaacaggggcaatggaacaagaacttcattcccgtttgctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atgaagcaaaagcatgagcaacaggggcaatggaacaagaacttcattcccgtttgctca 94

                                                                       
Query: 61  gatctcaaattcctagacactcaatataaggggaaaagtccagctttagtgaactcattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  gatctcaaattcctagacactcaatataaggggaaaagtccagctttagtgaactcattt 34

                                            
Query: 121 gctcttctttcctatctaataattatgctattc 153
           |||||||||||||||||||||||||||||||||
Sbjct: 33  gctcttctttcctatctaataattatgctattc 1


>gnl|LJGI|BP060110 
          Length = 343

 Score =  139 bits (70), Expect = 8e-33
 Identities = 73/74 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagcaaaagcatgagcaacaggggcaatggaacaagaacttcattcccgtttgctca 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 220 atgaagcaaaagcatgagcaacaggggcaatggaacaagaacttcattcccgttggctca 279

                         
Query: 61  gatctcaaattcct 74
           ||||||||||||||
Sbjct: 280 gatctcaaattcct 293


>gnl|LJGI|TC66408 weakly similar to UniRef100_Q4RWK8 Cluster: Chromosome 3 SCAF14987,
           whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome 3 SCAF14987, whole genome
           shotgun sequence - Tetraodon nigroviridis (Green
           puffer), partial (4%)
          Length = 595

 Score = 77.8 bits (39), Expect = 3e-14
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                       
Query: 3   gaagcaaaagcatgagcaacaggggcaatggaacaagaacttcattcccgtttgctcaga 62
           |||||||||||||||||| |||||||| |||||||||||||||||| ||   ||||||||
Sbjct: 135 gaagcaaaagcatgagcagcaggggcactggaacaagaacttcattgccaagtgctcaga 76

              
Query: 63  tct 65
           |||
Sbjct: 75  tct 73