Miyakogusa Predicted Gene
- Lj3g3v0429250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0429250.1 tr|G7IM52|G7IM52_MEDTR Disease-resistance protein
OS=Medicago truncatula GN=MTR_2g083650 PE=4
SV=1,72.54,0,TIR,Toll/interleukin-1 receptor homology (TIR) domain; no
description,NULL; NB-ARC,NB-ARC; DISEASE R,CUFF.40793.1
(1650 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343073 weakly similar to UniRef100_A7QHI1 Cluster: Ch... 299 3e-80
gnl|LJGI|TC81691 weakly similar to UniRef100_A2Q338 Cluster: RNA... 188 8e-47
>gnl|LJGI|FS343073 weakly similar to UniRef100_A7QHI1 Cluster: Chromosome chr5
scaffold_98, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_98, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 827
Score = 299 bits (151), Expect = 3e-80
Identities = 444/539 (82%), Gaps = 2/539 (0%)
Strand = Plus / Plus
Query: 45 atacgatgtgttcattagttttagaggtcccgaaacccgcaatacttttgttgatcatct 104
|||||| |||||||| ||||| |||||| | || || ||||| || ||||| ||||||||
Sbjct: 290 atacgacgtgttcatcagtttcagaggttctgacactcgcaacacctttgtggatcatct 349
Query: 105 ttacaaccacctcgtcaagaaaggcatttttgccttcaaggatgaccaaaggcttgagaa 164
|||| ||| |||||| ||||||||||| | ||||||||||||| | | ||| ||||
Sbjct: 350 ttacgcccatctcgtccgaaaaggcattttcgtcttcaaggatgacaagaagctccagaa 409
Query: 165 aggagaacccatttcattgcagcttctacaagcgattaaagattcaagggtttccgtcgt 224
|||||| |||||||| |||||||||||||| ||| | ||||| | ||||| | ||
Sbjct: 410 aggagagtccatttcagctcagcttctacaagcaattcgaaattcacgagtttctattgt 469
Query: 225 cgtcttctcaagagattacgcttcctcaacatggtgtttggatgaactggctgctattgc 284
|| ||||| | | |||| ||| |||| ||||||||||||||| |||||||||||||
Sbjct: 470 tgttttctcgaaaaattatgctgagtcaaggtggtgtttggatgaaatggctgctattgc 529
Query: 285 tgaatgccatgaagaattaaaacaaactgttttccctgttttttatgatgttgatccatc 344
||||||| |||||| || || |||||||||||||||||||| |||||||| ||||| ||
Sbjct: 530 tgaatgctgtgaagattttaagcaaactgttttccctgttttctatgatgtggatccttc 589
Query: 345 tcatgttcgaaaacaggatggggtgtaccatgatgcctttgttttacacacccagaaatt 404
|| ||| |||| ||| |||||||||| | ||||||||||||| |||| | || |||
Sbjct: 590 tcctgtaagaaaccagaatggggtgtatgaaaatgcctttgttttccacatgctgagatt 649
Query: 405 caaatatgacccggacaaggttgatcggtggaagagagctatgaggactttggctggatc 464
|||| |||| | |||| ||||||||| ||||||||||||||||| | ||||||||||||
Sbjct: 650 caaacatgatgcagacagggttgatcgatggaagagagctatgagaagtttggctggatc 709
Query: 465 agctggttgggatgtcaggaataagccggagtttgcagagattgaaaaaattgttcaagc 524
||| ||||||||||||||||||||||| || ||| |||||||||||| |||||| | ||
Sbjct: 710 agcaggttgggatgtcaggaataagccagaatttcgagagattgaaaatattgttgaggc 769
Query: 525 agtgataaaaacactgggtcataaa-ttctcaacatttactaatggtctagttgggata 582
||| ||| || || ||||||||||| ||||| | ||||| |||||||||||||||||||
Sbjct: 770 agttatagaagcattgggtcataaatttctc-agatttagtaatggtctagttgggata 827
>gnl|LJGI|TC81691 weakly similar to UniRef100_A2Q338 Cluster: RNA-directed DNA
polymerase; n=1; Medicago truncatula|Rep: RNA-directed
DNA polymerase - Medicago truncatula (Barrel medic),
partial (8%)
Length = 432
Score = 188 bits (95), Expect = 8e-47
Identities = 185/212 (87%), Gaps = 5/212 (2%)
Strand = Plus / Plus
Query: 483 gaataagccggagtttgcagagattgaaaaaattgttcaagcagtgataaaaacactggg 542
||||||||| |||||| |||||||||||||||| |||||||| ||| ||||| ||||
Sbjct: 21 gaataagcccgagtttncagagattgaaaaaat-gttcaagccaggatcaaaaccttggg 79
Query: 543 tcataaattctcaacatttactaatggtctagttgggataca-acctcacattgaagaaa 601
|||||||||||||| ||||| ||||||||||||||||||||| || | | |||||||||
Sbjct: 80 tcataaattctcaagatttagtaatggtctagttgggatacagccccccccttgaagaaa 139
Query: 602 tagaaaatcttttaaaattgagctcagaggaggaggatgtttttcgagttttaggaattt 661
|| ||||||||||||||||||||| |||||| || || ||||||||||||||| ||||
Sbjct: 140 tataaaatcttttaaaattgagctaagaggatgaaga---ttttcgagttttaggtattt 196
Query: 662 gggggatgggtggaataggaaagacaactcat 693
|| ||| ||| |||||||||||||||||||||
Sbjct: 197 ggaggacgggcggaataggaaagacaactcat 228