Miyakogusa Predicted Gene

Lj3g3v0429130.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0429130.1 Non Chatacterized Hit- tr|I1KDR0|I1KDR0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16337 PE,85.33,0,ARM
repeat,Armadillo-type fold; 26S PROTEASOME NON-ATPASE REGULATORY
SUBUNIT 5-RELATED,NULL; no desc,CUFF.40750.1
         (1575 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68086 similar to UniRef100_A7P1S2 Cluster: Chromosome...   860   0.0  
gnl|LJGI|BP036976 similar to UniRef100_A7P1S2 Cluster: Chromosom...   309   3e-83

>gnl|LJGI|TC68086 similar to UniRef100_A7P1S2 Cluster: Chromosome chr19 scaffold_4,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_4, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (25%)
          Length = 620

 Score =  860 bits (434), Expect = 0.0
 Identities = 434/434 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1142 tactcaatgctgaggcagaagaaaatctgcgacgcttggtctatgaaactgcatccagga 1201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    tactcaatgctgaggcagaagaaaatctgcgacgcttggtctatgaaactgcatccagga 61

                                                                        
Query: 1202 gctcaaagctgacaccatcgggtctttttctgtcagttttgcagcaggattcagaaatcc 1261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   gctcaaagctgacaccatcgggtctttttctgtcagttttgcagcaggattcagaaatcc 121

                                                                        
Query: 1262 gtttagcgggctatagaatgataagtggattggttgctcgaccatggtgcttgttggaga 1321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  gtttagcgggctatagaatgataagtggattggttgctcgaccatggtgcttgttggaga 181

                                                                        
Query: 1322 tatgctcaagacaagagattataaatatagtgaccaacccaagtactgagaccacaaaaa 1381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  tatgctcaagacaagagattataaatatagtgaccaacccaagtactgagaccacaaaaa 241

                                                                        
Query: 1382 taggtatggaagctagatataactgctgcaaggcgataagcaaatcattgacgctgtctg 1441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  taggtatggaagctagatataactgctgcaaggcgataagcaaatcattgacgctgtctg 301

                                                                        
Query: 1442 gtaggatttctgctgatcctgctattgcgggaatagctacaaagctgcaggaagctgttg 1501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  gtaggatttctgctgatcctgctattgcgggaatagctacaaagctgcaggaagctgttg 361

                                                                        
Query: 1502 gaatgggtccatatcttgttagaaagcatgttgaagcccaacctattgtgaagacagctg 1561
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  gaatgggtccatatcttgttagaaagcatgttgaagcccaacctattgtgaagacagctg 421

                          
Query: 1562 agagattttagttt 1575
            ||||||||||||||
Sbjct: 422  agagattttagttt 435


>gnl|LJGI|BP036976 similar to UniRef100_A7P1S2 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 290

 Score =  309 bits (156), Expect = 3e-83
 Identities = 256/275 (93%), Gaps = 17/275 (6%)
 Strand = Plus / Minus

                                                                       
Query: 224 acatgccttttgttcaagtcggtctgcaggcaga---ttctcaagc-agtcagat---cc 276
           |||||||||||||||||||||||||||||||||    ||||||||| |||||||    ||
Sbjct: 290 acatgccttttgttcaagtcggtctgcaggcagtaatttctcaagccagtcagaaatccc 231

                                                                       
Query: 277 ttag-cttgcaaaacagt-cact-tgccttc--tggataatct-tgataatgatcacaaa 330
           |||| ||||||||||||| |||| |||||||  |||||||||| ||||||||||||||||
Sbjct: 230 ttaggcttgcaaaacagttcactctgccttcnntggataatctntgataatgatcacaaa 171

                                                                       
Query: 331 gttgctgctcatctaatagcggaattcaacatatatcctcttttgcttgattgccttatc 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gttgctgctcatctaatagcggaattcaacatatatcctcttttgcttgattgccttatc 111

                                                                       
Query: 391 aagggcgatgaacaagtggcagctgtggcaatggatgcaataataaaattagctgctttt 450
           ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 110 aagggcgatgaacaagtggcagctgtggc-atggatgc-ataataaaattagctgctttt 53

                                              
Query: 451 cctgaaggcatgggaattatctttccatctgtcaa 485
           ||||||||| |||| ||||||||||||||||||||
Sbjct: 52  cctgaaggc-tggg-attatctttccatctgtcaa 20