Miyakogusa Predicted Gene

Lj3g3v0429080.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0429080.2 Non Chatacterized Hit- tr|Q97U72|Q97U72_SULSO
NADH oxidase, putative OS=Sulfolobus solfataricus
(str,29.41,1.4,seg,NULL,CUFF.40741.2
         (243 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59280 weakly similar to UniRef100_Q4SBJ3 Cluster: Chr...   466   e-131
gnl|LJGI|TC64809 similar to UniRef100_A7PL89 Cluster: Chromosome...    94   5e-19

>gnl|LJGI|TC59280 weakly similar to UniRef100_Q4SBJ3 Cluster: Chromosome 15
           SCAF14667, whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome 15 SCAF14667, whole genome
           shotgun sequence - Tetraodon nigroviridis (Green
           puffer), partial (7%)
          Length = 1308

 Score =  466 bits (235), Expect = e-131
 Identities = 241/243 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaattttcagtcactcacgccatttctacctcgcagtagacaggcttcaagtcaaatt 60
           |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 142 atgaatcttcagtcactcacgccatttctacctcgcagtagacaggcttcaagtcacatt 201

                                                                       
Query: 61  ggtattttcttattcaattcttcaattcgtgaacctgaaactgtgtttgctgaaaacagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggtattttcttattcaattcttcaattcgtgaacctgaaactgtgtttgctgaaaacagt 261

                                                                       
Query: 121 tgcgtaatttcattgcaacaaacgctggttgatcttctcgatttggtgggtcgacgaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgcgtaatttcattgcaacaaacgctggttgatcttctcgatttggtgggtcgacgaatt 321

                                                                       
Query: 181 ttagttggtcccgttctccccttcatttcctcttttgcattggtgaacgcgcttcatttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttagttggtcccgttctccccttcatttcctcttttgcattggtgaacgcgcttcatttt 381

              
Query: 241 tag 243
           |||
Sbjct: 382 tag 384


>gnl|LJGI|TC64809 similar to UniRef100_A7PL89 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (82%)
          Length = 1034

 Score = 93.7 bits (47), Expect = 5e-19
 Identities = 47/47 (100%)
 Strand = Plus / Plus

                                                          
Query: 12  gtcactcacgccatttctacctcgcagtagacaggcttcaagtcaaa 58
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  gtcactcacgccatttctacctcgcagtagacaggcttcaagtcaaa 141



 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 139 caaacgctggttgatcttctcgatttggtgggtcgacga 177
           ||||| |||||||||||||||||||||||||||||||||
Sbjct: 145 caaactctggttgatcttctcgatttggtgggtcgacga 183