Miyakogusa Predicted Gene

Lj3g3v0428960.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0428960.2 Non Chatacterized Hit- tr|I1KDP8|I1KDP8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41899
PE,75.78,0,seg,NULL; no description,NULL; RNase_T,Exonuclease, RNase
T/DNA polymerase III; Ribonuclease H-like,,CUFF.40732.2
         (972 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595066 similar to UniRef100_A7P1T2 Cluster: Chromosom...   490   e-138
gnl|LJGI|BP059823 similar to UniRef100_A7P1T2 Cluster: Chromosom...   184   7e-46

>gnl|LJGI|BW595066 similar to UniRef100_A7P1T2 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 487

 Score =  490 bits (247), Expect = e-138
 Identities = 247/247 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcacttctgagagcttcttctttgtccaagcttttctcccatcgtaatccattgctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   atggcacttctgagagcttcttctttgtccaagcttttctcccatcgtaatccattgctt 67

                                                                       
Query: 61  tcttcttcttctctttcacctcttacattgcaccactgcactccctcaccctctcttcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  tcttcttcttctctttcacctcttacattgcaccactgcactccctcaccctctcttcct 127

                                                                       
Query: 121 ccaatgcactccctcaccgtctctgcctccctttccacttccgacaacaccccatctcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ccaatgcactccctcaccgtctctgcctccctttccacttccgacaacaccccatctcca 187

                                                                       
Query: 181 gacacaacaacacgctctcgctggaaacccatgtgcctgtaccacacgcagggaaagtgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gacacaacaacacgctctcgctggaaacccatgtgcctgtaccacacgcagggaaagtgc 247

                  
Query: 241 accatga 247
           |||||||
Sbjct: 248 accatga 254



 Score =  208 bits (105), Expect = 5e-53
 Identities = 105/105 (100%)
 Strand = Plus / Plus

                                                                       
Query: 247 atggatgatcttatccaccttgagaagtttaatcatgattgctccagggagcttcaagtg 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atggatgatcttatccaccttgagaagtttaatcatgattgctccagggagcttcaagtg 442

                                                        
Query: 307 aactccgctgagttaaacaaaatatgccctcaaaatctagacttt 351
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aactccgctgagttaaacaaaatatgccctcaaaatctagacttt 487


>gnl|LJGI|BP059823 similar to UniRef100_A7P1T2 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 359

 Score =  184 bits (93), Expect = 7e-46
 Identities = 96/97 (98%)
 Strand = Plus / Minus

                                                                       
Query: 876 catgcttattgatggtgcactcatccagattactgcaaggaggaatccttcatctcctgg 935
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 catgcttattgatggtccactcatccagattactgcaaggaggaatccttcatctcctgg 296

                                                
Query: 936 aaacgtcaactttcttttcaagaaccgtattagatag 972
           |||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaacgtcaactttcttttcaagaaccgtattagatag 259