Miyakogusa Predicted Gene
- Lj3g3v0428800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0428800.1 tr|G7K4N4|G7K4N4_MEDTR Pre-mRNA-splicing factor
ISY1-like protein OS=Medicago truncatula GN=MTR_5g09,89.11,0,ISY1
domain-like,NULL; GB DEF: DBJ|BAA86474.1 (HYPOTHETICAL PROTEIN
AT3G18790/MVE11_17),NULL; FAMILY,CUFF.40722.1
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71988 similar to UniRef100_Q6K5F4 Cluster: 2 coiled c... 1134 0.0
gnl|LJGI|TC78426 similar to UniRef100_Q6K5F4 Cluster: 2 coiled c... 297 6e-80
gnl|LJGI|BP061315 weakly similar to UniRef100_Q8JIX2 Cluster: Eg... 66 4e-10
>gnl|LJGI|TC71988 similar to UniRef100_Q6K5F4 Cluster: 2 coiled coil domains of
eukaryotic origin (31.3 kD)-like protein; n=2; Oryza
sativa|Rep: 2 coiled coil domains of eukaryotic origin
(31.3 kD)-like protein - Oryza sativa subsp. japonica
(Rice), partial (59%)
Length = 673
Score = 1134 bits (572), Expect = 0.0
Identities = 581/584 (99%)
Strand = Plus / Plus
Query: 1 atggctcgtaacgaagagaaagcgcaatcgatgctgaaccgcttcatcaccatgaaagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atggctcgtaacgaagagaaagcgcaatcgatgctgaaccgcttcatcaccatgaaagcg 149
Query: 61 gaggagaagaagaaacccaaggaacgccgccccttcctcgccaccgagtgccgcgacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gaggagaagaagaaacccaaggaacgccgccccttcctcgccaccgagtgccgcgacctc 209
Query: 121 tccgaagccgacaaatggcgccagcaaatcatgcgcgaaatcggccgcaaagtcgccgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tccgaagccgacaaatggcgccagcaaatcatgcgcgaaatcggccgcaaagtcgccgag 269
Query: 181 attcagaacgaaggcctcggcgaacaccgcctccgcgacctcaacgacgagatcaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 attcagaacgaaggcctcggcgaacaccgcctccgcgacctcaacgacgagatcaacaaa 329
Query: 241 ctcatccgtgagaaatcgcattgggaacgccgcatcgttgaactcggtggccccaactac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctcatccgtgagaaatcgcattgggaacgccgcatcgttgaactcggtggccccaactac 389
Query: 301 actcgccactccgccaagatgactgacctcgacggcaacatcgtcgacgtccccaatcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 actcgccactccgccaagatgactgacctcgacggcaacatcgtcgacgtccccaatcca 449
Query: 361 tccggccgcggccccggataccgctacttcggcgccgcgaaaaaactccccggcgtccgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tccggccgcggccccggataccgctacttcggcgccgcgaaaaaactccccggcgtccgc 509
Query: 421 gaactctttgacaaaccccctgagctacgcaagcggcggacgcgatacgacatttataag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gaactctttgacaaaccccctgagctacgcaagcggcggacgcgatacgacatttataag 569
Query: 481 cggattgatgcggcttattatggataccgggatgacgaggatgggattctggagcggctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cggattgatgcggcttattatggataccgggatgacgaggatgggattctggagcggctg 629
Query: 541 gagccgtctgcggaggctgcgatgcgacgggaggcggcggagga 584
|||||||||||||| || |||||||||||||| |||||||||||
Sbjct: 630 gagccgtctgcggaagcggcgatgcgacgggaagcggcggagga 673
>gnl|LJGI|TC78426 similar to UniRef100_Q6K5F4 Cluster: 2 coiled coil domains of
eukaryotic origin (31.3 kD)-like protein; n=2; Oryza
sativa|Rep: 2 coiled coil domains of eukaryotic origin
(31.3 kD)-like protein - Oryza sativa subsp. japonica
(Rice), partial (31%)
Length = 722
Score = 297 bits (150), Expect = 6e-80
Identities = 150/150 (100%)
Strand = Plus / Plus
Query: 763 tttgtggtgcacgtgccgttgccggatgagaaggagattgagaagatggtgctggaaaag 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tttgtggtgcacgtgccgttgccggatgagaaggagattgagaagatggtgctggaaaag 370
Query: 823 aagaagatggagctgttgaataagtatgttagtgaggatctcatggatgagcagagtgaa 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aagaagatggagctgttgaataagtatgttagtgaggatctcatggatgagcagagtgaa 430
Query: 883 gctaaagacatgcttaacattcatcgttaa 912
||||||||||||||||||||||||||||||
Sbjct: 431 gctaaagacatgcttaacattcatcgttaa 460
Score = 176 bits (89), Expect = 2e-43
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 577 gcggaggagtggtaccggcttgataggattaggcaggaggcgaggaagggtgtgaaaagc 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gcggaggagtggtaccggcttgataggattaggcaggaggcgaggaagggtgtgaaaagc 184
Query: 637 ggggaggtggctgaggtgtcggctgcggt 665
|||||||||||||||||||||||||||||
Sbjct: 185 ggggaggtggctgaggtgtcggctgcggt 213
Score = 131 bits (66), Expect = 8e-30
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 1 atggctcgtaacgaagagaaagcgcaatcgatgctgaaccgcttcatcaccatgaaagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atggctcgtaacgaagagaaagcgcaatcgatgctgaaccgcttcatcaccatgaaagcg 127
Query: 61 gaggag 66
||||||
Sbjct: 128 gaggag 133
>gnl|LJGI|BP061315 weakly similar to UniRef100_Q8JIX2 Cluster: Egr-1; n=1; Clarias
gariepinus|Rep: Egr-1 - Clarias gariepinus (Sharptooth
catfish) (African catfish), partial (4%)
Length = 341
Score = 65.9 bits (33), Expect = 4e-10
Identities = 97/109 (88%), Gaps = 11/109 (10%)
Strand = Plus / Minus
Query: 815 tggaaaagaagaa--gatggagct-gttgaataagt--atgttagtgagga--tctca-t 866
|||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||| |
Sbjct: 331 tggaaaagaagannngatggagctcgttgaataagtnnatgttagtgagganntctcact 272
Query: 867 ggatgagca-gagtgaag-ctaaagacatgcttaaca-ttcatcgttaa 912
||||||||| |||||||| |||||||||||||||||| |||||||||||
Sbjct: 271 ggatgagcacgagtgaagnctaaagacatgcttaacacttcatcgttaa 223